Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3838 ATGGCTGCATTGGCGAAATTTCTCATCTTGCTACTATGGACGACAATGGTTGTTGAAGGCAACAGAGCTCTCTTTCCCTTCCCGGGCGTACCTTCGAAGACGATAGTACAGATCATAGATAATTTAACAGATCCACCTCAGAACTTGACGCTTCACTGCAAATCCAAGGACGATGATCTTGGAGAACACACAATCGGCGTGGGAAAGAACTACGAGTTCAAATTCAGATCCAACGTTTTAAAACCAGTAACGTTGTTTTTTTGCAGTTTCAGGTGGCCATCAGACGCTTCGTCTCACTCTTTTGACATATATGTTCAGAAACGAGACGAGAATAGTTGCGTGGAGCATAAAGGCGTTGCGTTGTGTTCCTGGAAAATATGGAAAGGAGGCGGCGACACTGGCCTTTTTCCGTCCAAGACAACCGTGCAAATCGTCAACACCTTGGCTCACCATGAGGACGTGACTATTCATTGCAAAGACAAACATAACGATCTTGGAGAGCACGTTCTCAAATTCAGAGAAATGTTTGAGTTCAGATTCAAGCCAAATCCTTTTCTAAAGGTCACTCTTTATTTTTGCAGTTTTTGGTGGCCAATATTGTCTGAACCTCATTACTTTGACATATACATACAAGAACGAGACACTTGCACAGTGTGTAATTGGCACGTAAATTATTATGGTCCTTGCTTATTTGGTGTTTGTTATCCTTGGCATTATAAGTATCAGCCACCATTATCAGCAGATGCTCCTCTTCCTCTTGCTGGATCAAATGCCAATATTACTCAATCTCTTCCATGA 798 0.4236 MAALAKFLILLLWTTMVVEGNRALFPFPGVPSKTIVQIIDNLTDPPQNLTLHCKSKDDDLGEHTIGVGKNYEFKFRSNVLKPVTLFFCSFRWPSDASSHSFDIYVQKRDENSCVEHKGVALCSWKIWKGGGDTGLFPSKTTVQIVNTLAHHEDVTIHCKDKHNDLGEHVLKFREMFEFRFKPNPFLKVTLYFCSFWWPILSEPHYFDIYIQERDTCTVCNWHVNYYGPCLFGVCYPWHYKYQPPLSADAPLPLAGSNANITQSLP 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3838 265 Pfam Plant self-incompatibility protein S1 36 128 IPR010264 -
Prci1g3838 265 Pfam Plant self-incompatibility protein S1 141 231 IPR010264 -
Prci1g3838 265 PANTHER - 136 230 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3838 Prci-Chr1 54335651 54338932 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3838 133 240 Carbohydrate Esterase AT3G16970 37.190 1.12e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3838 - - pcin:129297219 569.696