Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3837 ATGGAGCCTCTCATCCTGCTACTGCTAGCATGGGCAACATTAATTGTTGAGCGTCACGAAGCTCTCTTTCTCTTTCCAGGCGTGCCTCCGAAGACGATAGTGCAGATCATCAACAATATCACTGATCCGCCTCAGGACTTGACTCTTCACTGTAAATCTAAGGACGATGATCTTGGGGAACACACAATCAGCGTGGGAGGGAAATACGAGTTCATATTCAGACCAAATGTTTTAAAACCAGTGACGTTGTTTTTTTGCAATTTCAGGTGGCCATCTGACACATCGTTTCACTACTTTGATATATATATTCAAAAACGAGACGAAGATAGTTGCTTGGACAAGGATGTTACCTTGTGTTATTGGAAAATATGGAAAGGAGGTGCGTGTAAATATGATAAGGACTTGAAAACCTACACCAATTGTTACCCATGGAACCCTGCTCCTGCTATTGTTGCGTCGTCCGTCATCAATACATCCTTTATCTAA 486 0.4239 MEPLILLLLAWATLIVERHEALFLFPGVPPKTIVQIINNITDPPQDLTLHCKSKDDDLGEHTISVGGKYEFIFRPNVLKPVTLFFCNFRWPSDTSFHYFDIYIQKRDEDSCLDKDVTLCYWKIWKGGACKYDKDLKTYTNCYPWNPAPAIVASSVINTSFI 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3837 161 Pfam Plant self-incompatibility protein S1 34 144 IPR010264 -
Prci1g3837 161 PANTHER - 29 133 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3837 Prci-Chr1 54334038 54334523 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3837 30 145 Carbohydrate Esterase AT3G16970 43.966 4.06e-24 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3837 - - pcin:129297220 338.576