Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3823 ATGTGTCAGAGCAACACCCCTCCTCCGCCGTCTTCTCCTTCCGATCTCACACACAGGAATTCTCTGAGTCGTCTCAGCACACCTCGCCGCAAAAACAGAACAAAAACCAGGAGGCCCAAGTTCCTGAGTCTCCGCCTCCAACTCTCATCAAACCAGTCAGATCCAATGACACATCATCAGCAGCTCAACCTCTTCCCCTTACACCCTGAAAACTTGATCCATCACAAAGATGTCACGAACGACGACACCAACGTGGCTTTCCTCTTCACTACCCACGGCCCCGCGACACTCAACGGCCTTCTCGAACAGGACTATTCCTCCTCCACCACCACCAACACCACCGTGTCGGAGGAGGATTCTATGTCGCCACAGTGTTTGACGGCGTGCCCCTTCGACGAGGAGAACGGGAGATCACTGGTACGGAAGGCCATGAAGAGGAGGAACGAGGAGGATGAAAGGGACGGGAGGGAGGAGAGGTGGGTGTGCTACTCGGAGGTCACAAGCTATTGCAGCACCGCCACGACGGCGTCGTTCGGGTTGCTGTCCTTGAAGCTGGATTACGAGGGCATCTTAAATGCCTGGTCTGACAAAGGTCCTCTTTACGTTCCGAGCGAGACACAGCAAACAGTCCCCGACTTCCTCGATCACGTCCGTCCAAACCATCCGCCACATGTTGTGTGGGGGCACAGTAGTGTGGTGGAGAAGGCATGGGAAGAGAGCGAGAAGAAGACGAAAGGGAAGGAAGGAATGGGACGGAAGACGGGACAAAGGGAGGCAAGCGTGCTGAGATACAAGGAGAAGAGGCAGAGCAGGCTCTTCTCCAAGCGAATCCGCTACGAGGTTCGTAAGCTCAATGCTGAGAAGCGCCCCAGGATGAAGGGACGATTTGTGAAGAGGGACTGA 903 0.5526 MCQSNTPPPPSSPSDLTHRNSLSRLSTPRRKNRTKTRRPKFLSLRLQLSSNQSDPMTHHQQLNLFPLHPENLIHHKDVTNDDTNVAFLFTTHGPATLNGLLEQDYSSSTTTNTTVSEEDSMSPQCLTACPFDEENGRSLVRKAMKRRNEEDERDGREERWVCYSEVTSYCSTATTASFGLLSLKLDYEGILNAWSDKGPLYVPSETQQTVPDFLDHVRPNHPPHVVWGHSSVVEKAWEESEKKTKGKEGMGRKTGQREASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRD 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3823 300 ProSiteProfiles CCT domain profile. 257 299 IPR010402 GO:0005515
Prci1g3823 300 MobiDBLite consensus disorder prediction 24 39 - -
Prci1g3823 300 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 2 300 - -
Prci1g3823 300 MobiDBLite consensus disorder prediction 1 39 - -
Prci1g3823 300 Pfam CCT motif 257 299 IPR010402 GO:0005515
Prci1g3823 300 MobiDBLite consensus disorder prediction 238 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3823 Prci-Chr1 54228817 54231204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3823 181 299 C2C2-CO-like Transcription Factor Family AT1G73870 48.739 2.31e-24 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci1g3823 CCT 2.7e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3823 - - gmx:100798231 239.195