Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3808 ATGATTTTGGATGATCCTCTTTCTTTAACCTCGAAGAGGAGGCGGATCACAGCCATTGATTCCATGGATGCTGAAGCAGCTAAGGCCAAGCTTGCAGCTATCAAGGAAAGGTTTGGACGAGAGATCCGTGTATTCGAAACATCTTCAGTTTCTGCAGCACCAAATGCTACAGCTAACAATGAAGAGACTGATGATTTCTATGAGTTCACCGCTGAAGATTATTATCAACTGTTGGCTACTAAAAAGGAAGATAAATTCTTGAAGACTCGCAAGATCCGAGAAGCAGAAGAGGCGGCTCGTAGGTCAAGAATGACCAAAGCTGTTATTAGAGTTCGCTTTCCTGATAATCACACATTAGAGGCTACATTTCACCCTTCCGAAACACTCCAAAGTTTAGTTGATTTACTCACCAAAGTGATTGCACAACCAGAACAGCCATTCTGTATATATACTACTCCCCCAAGGAAGCTGATTAAAGACATGTCTCAAGATTTTTATGCTGCTGGCTTTTGTCCCGGTGCCATCGTGTACTTTTCTCATAATACTCCCCTAGGTGAAAGCAGCATGGCTGAACATACAGGGCCCTTCCTACTAGAGGATGTCGTGTCTTTGAAGGGGTTGGATGTAACTAATGACCATGGCCAGCAATCTGAACCTGTACAGTCTGCACCTGAACCTGTTGAAGCTTCACAAACCCCTGCTGTTCAAGAACGCAAGCCTGCTGATAAAAAGCTTGTCAAGCCGAAGTGGTTAAAAATGTGA 762 0.4383 MILDDPLSLTSKRRRITAIDSMDAEAAKAKLAAIKERFGREIRVFETSSVSAAPNATANNEETDDFYEFTAEDYYQLLATKKEDKFLKTRKIREAEEAARRSRMTKAVIRVRFPDNHTLEATFHPSETLQSLVDLLTKVIAQPEQPFCIYTTPPRKLIKDMSQDFYAAGFCPGAIVYFSHNTPLGESSMAEHTGPFLLEDVVSLKGLDVTNDHGQQSEPVQSAPEPVEASQTPAVQERKPADKKLVKPKWLKM 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3808 253 Gene3D - 96 179 - -
Prci1g3808 253 Pfam UBX domain 105 163 IPR001012 GO:0005515
Prci1g3808 253 ProSiteProfiles UBX domain profile. 102 178 IPR001012 GO:0005515
Prci1g3808 253 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 1 253 IPR044232 GO:0032984|GO:0051117
Prci1g3808 253 CDD UBX2_UBXN9 107 179 - -
Prci1g3808 253 MobiDBLite consensus disorder prediction 209 253 - -
Prci1g3808 253 SUPERFAMILY Ubiquitin-like 81 178 IPR029071 -
Prci1g3808 253 MobiDBLite consensus disorder prediction 237 253 - -
Prci1g3808 253 MobiDBLite consensus disorder prediction 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3808 Prci-Chr1 54132375 54137906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3808 36 135 C2H2 Transcription Factor Family AT2G01650 32.692 3.18e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3808 K15627 - gmx:100818386 354.369