Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3807 ATGATTTTGGATGATCCTCTTTCTTTAACCTCGAAGAGGAGGCGGATCACAGCCATTGATTCCATGGATGCTGAAGCAGCTAAGGCCAAGCTTGCAGCTATCAAGGAAAGGTTTGGACGAGAGATCCGTGTATTCGAAACATCTTCAGTTTCTGCAGCACCAAATGCTACAGCTAACAATGAGACTGATGATTTCTATGAGTTCACCGCTGAAGATTATTATCAACTGTTGGCTACTAAAAAGGAAGATAAATTCTTGAAGACTCGCAAGATCCGAGAAGCAGAAGAGGCGGCTCGTAGGTCAAGAATGACCAAAGCTGTTATTAGAGTTCGCTTTCCTGATAATCACACATTAGAGGCTACATTTCACCCTTCCGAAACACTCCAAAGTTTAGTTGATTTACTCACCAAAGTGATTGCACAACCAGAACAGCCATTCTGTATATATACTACTCCCCCAAGGAAGCTGATTAAAGACATGTCTCAAGATTTTTATGCTGCTGGCTTTTGTCCCGGTGCCATCGTGTACTTTTCTCATAATACTCCCCTAGGTGAAAGCAGCATGGCTGAACATACAGGGCCCTTCCTACTAGAGGATGTCGTGTCTTTGAAGGGGTTGGATGTAACTAATGACCATGGCCAGCAATCTGAACCTGTACAGTCTGCACCTGAACCTGTTGAAGCTTCACAAACCCCTGCTGTTCAAGAACGCAAGCCTGCTGATAAAAAGCTTGTCAAGCCGAAGTGGTTAAAAATGTGA 759 0.4387 MILDDPLSLTSKRRRITAIDSMDAEAAKAKLAAIKERFGREIRVFETSSVSAAPNATANNETDDFYEFTAEDYYQLLATKKEDKFLKTRKIREAEEAARRSRMTKAVIRVRFPDNHTLEATFHPSETLQSLVDLLTKVIAQPEQPFCIYTTPPRKLIKDMSQDFYAAGFCPGAIVYFSHNTPLGESSMAEHTGPFLLEDVVSLKGLDVTNDHGQQSEPVQSAPEPVEASQTPAVQERKPADKKLVKPKWLKM 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3807 252 ProSiteProfiles UBX domain profile. 101 177 IPR001012 GO:0005515
Prci1g3807 252 MobiDBLite consensus disorder prediction 236 252 - -
Prci1g3807 252 SUPERFAMILY Ubiquitin-like 80 177 IPR029071 -
Prci1g3807 252 MobiDBLite consensus disorder prediction 208 228 - -
Prci1g3807 252 Gene3D - 95 178 - -
Prci1g3807 252 Pfam UBX domain 104 162 IPR001012 GO:0005515
Prci1g3807 252 CDD UBX2_UBXN9 106 178 - -
Prci1g3807 252 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 1 252 IPR044232 GO:0032984|GO:0051117
Prci1g3807 252 MobiDBLite consensus disorder prediction 208 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3807 Prci-Chr1 54132375 54137906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3807 36 134 C2H2 Transcription Factor Family AT2G01650 32.692 2.62e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3807 K15627 - gmx:100818386 352.058