Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3779 ATGCCACAGGCCGATCCAATGAGGCATATGTGCCTCTGTCTTCTGCTTATTTCGTGGATTTTGTCTATCCCACGTACCCATGAACTACAAGTTGCCCAGACCCAAGTCTTATTACAGATGAGGACGTATTTTGAGTACCCCGCCTCGCTGCAAAGTTGGGGAAATTATCACGGTGACTTCTGTAACCTTTCTTCTTCTACACATATGAGCATTAAATGTCAAGATAATTCTGTATCTGAGCTTAAAATTAGGGGAGACAAAACTGCGAAGTCTGATGAGTTCAATGGATTTGCAATTCCCAATCAAACGCTGTCGACGAAGTTCTCTATTGATTCTTTTATCACCGCATTAACGAAGTTGACCAACTTAAGGGTTCTTAGCCTGGTGTCCTTGGGAATTTGGGGTCATCTTCCGGACAAGATTCACCGATTATCTCTGCTCGAAGTTCTGGACCTGAGCTCAAATTTCTTGTTCGGTTCTATCCCACCGAAAATTTCCGCAATGGTAAAGCTCCATACACTGAAACTCGATGGCAATTATTTCAACAACACAATGCCCGATTGGTTCGATTCATTGTCTAATCTGAATGTCTTGAGTTTGAAAACCAACACCTTGCGTGGTTCGTTCCCCTCTTCGTTGTGCAAAATAAAGACACTCACCGATATTTCTTTGTCTCGCAATGAGCTATCTGGTGAATTGCCTGATTTGAGCGCTCTCAGTGGCCTGCGTGTTCTGAATTTAAGAGAAAACCATTTAGGTTCTGAACTGCCAAAGATGCCCACAGGAGTGGTCACAGTTCTGCTAAGCAGTAACTCATTTTCTGGCGAGATACCTAAGCAGTTCGGTGAATTGGGTCGGCTTCAACATCTAGATCTTTCGGCAAATCACCTGAGTGGAATACCTCCATCTTCCCTGTTCTCATTGCCAAACATCAGTTATTTAAATTTAGGTAGCAATGTGCTAAGTGGGTCACTTCCAGATCGACTGAATTGTGGCAGCAAACTTGGTTTTGTGGATATTGCTAATAACAAAATAATTGGTGGACTTCCTTCTTGCTTGGCCAATACGTCGGACAGAAGAGTTGTCAAATATGATGGAAATTGTTTGACTCTCGATTCTCAAGGTCAGCAGCCAGGGTCTTACTGTGAAGAAACCAAGACGGACAGGAAGAAATCGATGGCGTGGAAAATAACTGTAGCAGGGGCCATTACTATTGGACTTGTTCTTACCCTTGGGCTTTCGGTACTGGGAGTTTTCTTTTGTAGAAAATGTCAGAGGAGAAGGACGGCTAAGCATTATTTGTTGTCAAAGACTGTGCAAGATAATTCCACTACACGGCTTTCATCTCAACTCCTCGCAAATGCCAGGTTCATTTCTCAGGCGGTGAAGCTAGGGGCACAAACTACTTCAATCTGTCGACCAATGTCAGTTGAAGAGTTGAAGGAAGCCACCAGAAACTTTGACTCGTCAGCGTTTATCGGTGAAGGCTCCTTGGGAAAGCTATACAAAGGTAAACTGGAGAATGGATCCTATGTGGCAATACGATCTTTGGCTCTGTCAAAGAAATGCTCAATTCAAAATCTTAAAGCTCGGTTGGATTTACTCTTAAAGCTTCACCATCCAAATTTGGTCAGCCTCTTGGGTCACTGTATTGATAGTTGTGAACAACGTGATTCAACCACCAACAAACTTCATCTTGTATACGAGTATGTGCCCCATGGAACTTACCGTGCCTATCTGTCAGAGTTCTCTCTAGAGAAGCCGCTCAAATGGTCTGATAGATTGACAATTTTAATTGGCATTGCCAAGGCTGTGCACTTTTTACATACTGGGGTTATTCCAGGTTGTTTTAGCAACCGATTAAAGACGAACAGTATTTTGCTTGATGAGCATTACATTCCCAAATTAAGCGACTATGGAATATCCATCCTTGGAGAAGAAATTGAAAGGTTTGAGGCAATGAGACATGACTCAAAATCATGCCAAAGGGAACCGTTTGAGGATGATGTTTATAACTTTGGATTCATATTGCTTGAATCACTTGTTGGACCCATAGCTAGCGGAAAAGGGCAAGCGTATTTTCTGAACGAGAAGGCATCCTTCGGAAGTCAAGATGGCAGAAGAAAAATTGTGGATCCCATAGTGTTGACATCTAGCTGTCACGAGTCCTTATCAATCGCAATAGCTATAACAACCAAATGCATATCCCCGGAACTATCTTCTCGCCCCTCATTTGAGGATGTCCTGTGGAACTTACAGTATGCAGCTCAAGTGCAGGCCACAGCAGATGCAGACCAGAAATCAGAGTCTACGTCATAA 2319 0.4304 MPQADPMRHMCLCLLLISWILSIPRTHELQVAQTQVLLQMRTYFEYPASLQSWGNYHGDFCNLSSSTHMSIKCQDNSVSELKIRGDKTAKSDEFNGFAIPNQTLSTKFSIDSFITALTKLTNLRVLSLVSLGIWGHLPDKIHRLSLLEVLDLSSNFLFGSIPPKISAMVKLHTLKLDGNYFNNTMPDWFDSLSNLNVLSLKTNTLRGSFPSSLCKIKTLTDISLSRNELSGELPDLSALSGLRVLNLRENHLGSELPKMPTGVVTVLLSSNSFSGEIPKQFGELGRLQHLDLSANHLSGIPPSSLFSLPNISYLNLGSNVLSGSLPDRLNCGSKLGFVDIANNKIIGGLPSCLANTSDRRVVKYDGNCLTLDSQGQQPGSYCEETKTDRKKSMAWKITVAGAITIGLVLTLGLSVLGVFFCRKCQRRRTAKHYLLSKTVQDNSTTRLSSQLLANARFISQAVKLGAQTTSICRPMSVEELKEATRNFDSSAFIGEGSLGKLYKGKLENGSYVAIRSLALSKKCSIQNLKARLDLLLKLHHPNLVSLLGHCIDSCEQRDSTTNKLHLVYEYVPHGTYRAYLSEFSLEKPLKWSDRLTILIGIAKAVHFLHTGVIPGCFSNRLKTNSILLDEHYIPKLSDYGISILGEEIERFEAMRHDSKSCQREPFEDDVYNFGFILLESLVGPIASGKGQAYFLNEKASFGSQDGRRKIVDPIVLTSSCHESLSIAIAITTKCISPELSSRPSFEDVLWNLQYAAQVQATADADQKSESTS 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3779 772 Gene3D Ribonuclease Inhibitor 30 263 IPR032675 -
Prci1g3779 772 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 30 261 - -
Prci1g3779 772 Pfam Leucine rich repeat 265 321 IPR001611 GO:0005515
Prci1g3779 772 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Prci1g3779 772 ProSiteProfiles Protein kinase domain profile. 487 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3779 772 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 263 387 - -
Prci1g3779 772 ProSiteProfiles Leucine-rich repeat profile. 286 307 IPR001611 GO:0005515
Prci1g3779 772 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 570 - -
Prci1g3779 772 SUPERFAMILY Protein kinase-like (PK-like) 469 752 IPR011009 -
Prci1g3779 772 SUPERFAMILY L domain-like 36 370 - -
Prci1g3779 772 Gene3D Transferase(Phosphotransferase) domain 1 572 771 - -
Prci1g3779 772 SMART LRR_typ_2 239 262 IPR003591 -
Prci1g3779 772 SMART LRR_typ_2 144 168 IPR003591 -
Prci1g3779 772 SMART LRR_typ_2 284 307 IPR003591 -
Prci1g3779 772 SMART LRR_typ_2 308 332 IPR003591 -
Prci1g3779 772 Gene3D Ribonuclease Inhibitor 264 389 IPR032675 -
Prci1g3779 772 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 398 762 - -
Prci1g3779 772 Pfam Protein tyrosine and serine/threonine kinase 492 682 IPR001245 GO:0004672|GO:0006468
Prci1g3779 772 Gene3D Phosphorylase Kinase; domain 1 449 570 - -
Prci1g3779 772 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 571 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3779 Prci-Chr1 53978081 53983037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3779 12 700 Miscellaneous Gene Families AT5G14210 57.389 0.0 770
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Prci1g3779 PK_Tyr_Ser-Thr 4.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3779 - - gmx:100784640 1068.91