Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3774 ATGATCACTAGGCTTCTCCACCTGAGAGCTTGGGCCTTTTTGTTCTTCTGCTTCTCTGTTTTGTCGCTCGGACAAGAGCTCGTCAGCTGCAACACAACATCCCCAGATGCCTCTGGCTACCGTTGCAGTGTGAATGAATCACAATGTGGAACATTTGCAGTTTTCTTCACCAGTTCATACTACTCATCTCTCTTCAACTTGAGCTTTTACCTGGGAATCAATCGCTATGTGGTTGCGGATGCAAATGGGTTTTCTGCAGAAACAGAATTTCTTCTTCATGAACAACCTCTACTAATACCAATAGACTGCAAATGCAAAGGCGGCTTCTTTGGCGCTGAAATAACCAAAACTACCATGAAAGGTGAGAGCTTTTATGGGATTGCTCAGTCGCTGGAAGGCTTGACAACCTGCATGGCTATTAGTAACAAGAATCCAGGTGTGTCACCTTGGGATCTCGATGATAATACCAGATTGCTGATCCCTCTGAGATGTGCATGTCCCTTATCATCTAAAGTTTCTCCAGAGCCGAAGCTTCTGATTTCTTACCCAGTGAGAGAAGGCGACACAGTTCTTAACTTGGCATCAAAGTTTAATACAAGTGCAGAAGCAATAATGAAAGCAAATAACATATTCTCCAAAGATTTCAAACCTGCTAAGCTCACGCCCTTTACCTCTCTTCTGATCCCACTCAATGGCAAGCCTGTTCTTGGTCCTCTGGCTAAACCCAGGGAACCCAATTCGGGTAATCGATCAAGCAGTATACCAGTGATTAATCCATCACACAAGAAGCCCAGAACGTGGAAGGCTGAATTGTACATTGGGCTAGCTGGCGTCGCTGTTGGAGTTTTGTTTGCTTTTCTAGCAGCTTTAGTTGTGATTAGATTGAAGAACGGGAAGAAAGAGAAATCATCCAAAAGAAGCAATTTGGAGCTGCAACATCTTAATGTAAGCGCAAGAACCACCAGCGACAAGAAGAAAGTTTCGTTCGAAGGATCCCAGTATGGGAAAATAATCGACACAGCTCCTCGTAAGATGCTGCTGGAGACATTCACCCTTGAAGACCTAAAAAAAGCAACGGAGGATTTCAGTTCAAGCAATCTCATAGAGGGATCTGTATTTCACGGCCGTCTGGAAGGGAAAAACATGGCAATCAAACGAGCACATACAGAAACGGTTTTAAAAATCGATCTCGGGCTCTTCCATAACACAATCCACCATCACCCTAACATTCTTAGGATGCTCGGAACGTGTTCAACAGAAGGTCCCGAGTCATATCTGGTTTTCGAGCATGCAAAAAACGGGTCTTTGAAAGACTGGCTTCATGGTGGGTTGGCCATCAAGAACGAGTTCATATCTTCCTGCAATTGCTTCCTCACGTGGAGTCAGAGGCTCAGGATCTGCCTTGACGTGGCCATGGCCCTGCAATATATGCACCACGTCATGAACCCAAGCTATGTCCACAGAAACATAAAGAGCAGGAACATCTTTCTGGACGAAGAATTCAGTGCCAAGATTGGGAACTTCGGGATGGCGGGCTGTGTCGAGAACGAAACAGAGGATCCAATGTTCTACTCAACCAACCCTGCATCCTGGAATCTTGGTTATTTGGCACCAGAATATGTACACCAAGGCTTAATTTCTCCAAGTACTGATATTTTTGCTTATGGAGTGGTTTTGCTGGAAGTTTTGTCTGGTCAGACACCTATAAGCAGGCCCAATGAGAAAGGGGAAGGAAGCGTTTGGCTCACCGATAAAATAAAGTCTGTTCTGAAGTCAGAAAATGAGGAAGAACTGAGGGGGTGGATGGACAAGGCAGTAGGTGAGAATTATTCATTCGATGCAGCAAGAACAGTGGCAAATATTGCTAGAGCTTGTGTAGAGGAAGATTATAGTATGAGGCCGGTTGCAGGGGAAGTTGTGGAGAAGCTGTCCAGATTGGTGGAGGAACTTCCAGAAGAAGAACGCATGTTGATGTCTGAAAGCTCTTGCAAGCCTCTGGTGAAAGCAGTGGCAAAACCATGA 2022 0.451 MITRLLHLRAWAFLFFCFSVLSLGQELVSCNTTSPDASGYRCSVNESQCGTFAVFFTSSYYSSLFNLSFYLGINRYVVADANGFSAETEFLLHEQPLLIPIDCKCKGGFFGAEITKTTMKGESFYGIAQSLEGLTTCMAISNKNPGVSPWDLDDNTRLLIPLRCACPLSSKVSPEPKLLISYPVREGDTVLNLASKFNTSAEAIMKANNIFSKDFKPAKLTPFTSLLIPLNGKPVLGPLAKPREPNSGNRSSSIPVINPSHKKPRTWKAELYIGLAGVAVGVLFAFLAALVVIRLKNGKKEKSSKRSNLELQHLNVSARTTSDKKKVSFEGSQYGKIIDTAPRKMLLETFTLEDLKKATEDFSSSNLIEGSVFHGRLEGKNMAIKRAHTETVLKIDLGLFHNTIHHHPNILRMLGTCSTEGPESYLVFEHAKNGSLKDWLHGGLAIKNEFISSCNCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFSAKIGNFGMAGCVENETEDPMFYSTNPASWNLGYLAPEYVHQGLISPSTDIFAYGVVLLEVLSGQTPISRPNEKGEGSVWLTDKIKSVLKSENEEELRGWMDKAVGENYSFDAARTVANIARACVEEDYSMRPVAGEVVEKLSRLVEELPEEERMLMSESSCKPLVKAVAKP 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3774 673 Gene3D Phosphorylase Kinase; domain 1 338 430 - -
Prci1g3774 673 SUPERFAMILY LysM domain 180 218 IPR036779 -
Prci1g3774 673 SMART LysM_2 181 229 IPR018392 -
Prci1g3774 673 Pfam Protein tyrosine and serine/threonine kinase 397 643 IPR001245 GO:0004672|GO:0006468
Prci1g3774 673 SUPERFAMILY Protein kinase-like (PK-like) 341 643 IPR011009 -
Prci1g3774 673 CDD LysM 180 214 IPR018392 -
Prci1g3774 673 MobiDBLite consensus disorder prediction 245 259 - -
Prci1g3774 673 Gene3D LysM domain 167 234 IPR036779 -
Prci1g3774 673 MobiDBLite consensus disorder prediction 239 259 - -
Prci1g3774 673 ProSiteProfiles Protein kinase domain profile. 323 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3774 673 Pfam LysM domain 182 229 IPR018392 -
Prci1g3774 673 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 24 650 - -
Prci1g3774 673 ProSiteProfiles LysM domain profile. 180 228 IPR018392 -
Prci1g3774 673 Gene3D Transferase(Phosphotransferase) domain 1 431 664 - -
Prci1g3774 673 FunFam PTI1-like tyrosine-protein kinase 3 431 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3774 Prci-Chr1 53953666 53956411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3774 39 668 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 40.000 1.17e-149 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Prci1g3774 PK_Tyr_Ser-Thr 8.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3774 - - qsa:O6P43_004800 948.732