LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g3768	ATGCTCTCGTTACGAGACTACAACTTTTTTCCCAGTTTTTCGCAGCGCTCGTGCTCCGCACAAAACAATACCGATAAAGTGTGGCATAAACAGAGCGAAGCAATGCCGGAGGAGACGACTCCGATCGACTATGTGATGGAGGCAGCTTCAGGGCCTCACTTCTCCGGCCTACGCCTTGACGGTCTCCGTTCATCTCTACCTTCTCCATATTCGTCTCCCATTCATCATTTCTCTGCTTCTGCTCTTGATTCCTCAACCTTAGCCCATGATTCTTCTCATAAACAGCCTTTCGTTATTGGAGTTTCTGGAGGTACTGCTTCCGGAAAGACCACTGTATGTGACATGATTATCCAGCAGCTTCACGATCATCGAGTTGTACTTGTCAATCAGGATTCATTTTATCGGGGTTTGACGCCTTCCGAAATGGAACGTGTGCACGAGTACAATTTTGATCATCCAGACGCTTTTGACACCGAGCAGCTTTTAGATTGCATGCAAAAGCTCCTAGGCGGCCACAGCGTCCAAGTCCCAATTTATGACTTTAAGAAGCACCAGCGCTCTACTGATAGTTTCCGACAGGTCAATGCTTCTGATGTCATTATATTAGAGGGAATCCTTGTTTTCCATGACCAACGTGTTCGTGATCTGATGAACCTGAAAATTTTTGTTGATTCAGATGCGGATGTAAGGCTTGCTCGTAGAATTAGACGTGATACAGTGGAAAGAGGTAGGGATGTAAGCTCTGTTCTTGAACAGTATGCAAAGTTTGTCAAGCCTTCCTTTGATGATTTTATTCATCCATCAAAAAAGTATGCTGATGTGATCATTCCACGAGGAAGTGATAATCATGTTGCCATTGATCTTATTGTACAACATATCCAGACCAAACTTGGTCAACATGATATGTGCAAGATATACTCTAATCTGTATGTTATTCTGTCAACATTCCAGATCCGAGGAATGCATACATTGATTCGTGATCGAGACATATCAAAGCATGATTTTGCATTTTACTCAGATAGACTTATACGGCTGGTTGTTGAGCATGGCCTTGGGCATTTGCCATTCACTGAAAAGCAAGTAGTTACGCCAACAGGATCTATCTATACTGGAGTTGACTTCTGCAAGAAATTATGTGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAAAATGCATTACGTGCATGTTGTAAAGGTATTAAAATAGGCAAAATTCTGATTCACCGAGATGGAGACTATGGAAAACAGCTAATATACGAGAAGCTTCCCCAGGACATTTCAGAACGTCATATTTTGCTTCTTGACCCTGTCCTTGCTACAGGTAATTCTGCAAGCCAAGCAATTGAGTTGCTCATTCAGAAAGGAGTTCCAGAATCCCACATAATATTCCTGAATCTCATCTCTGCACCTGAGGGAATCCGCTGTGTGTGTAAAAGGTTTCCGTCCTTGAAAATTGTAACATCCGAGATTGACGTTGGCCTAAATGAAGAGTTCCGTGTAATCCCTGGAATGGGCGAGTTTGGTGATCGCTACTTCGGTACTGATGATTGA	1554	0.4305	MLSLRDYNFFPSFSQRSCSAQNNTDKVWHKQSEAMPEETTPIDYVMEAASGPHFSGLRLDGLRSSLPSPYSSPIHHFSASALDSSTLAHDSSHKQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPSEMERVHEYNFDHPDAFDTEQLLDCMQKLLGGHSVQVPIYDFKKHQRSTDSFRQVNASDVIILEGILVFHDQRVRDLMNLKIFVDSDADVRLARRIRRDTVERGRDVSSVLEQYAKFVKPSFDDFIHPSKKYADVIIPRGSDNHVAIDLIVQHIQTKLGQHDMCKIYSNLYVILSTFQIRGMHTLIRDRDISKHDFAFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSIYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDYGKQLIYEKLPQDISERHILLLDPVLATGNSASQAIELLIQKGVPESHIIFLNLISAPEGIRCVCKRFPSLKIVTSEIDVGLNEEFRVIPGMGEFGDRYFGTDD	517

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g3768	517	Gene3D	-	91	299	IPR027417	-
	Prci1g3768	517	Pfam	Phosphoribulokinase / Uridine kinase family	98	284	IPR006083	GO:0005524\|GO:0016301
	Prci1g3768	517	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	91	289	IPR027417	-
	Prci1g3768	517	PANTHER	URIDINE KINASE	88	426	-	-
	Prci1g3768	517	PRINTS	Uridine kinase signature	96	113	-	-
	Prci1g3768	517	PRINTS	Uridine kinase signature	171	186	-	-
	Prci1g3768	517	PRINTS	Uridine kinase signature	242	253	-	-
	Prci1g3768	517	PRINTS	Uridine kinase signature	264	277	-	-
	Prci1g3768	517	PRINTS	Uridine kinase signature	126	137	-	-
	Prci1g3768	517	PRINTS	Uridine kinase signature	228	238	-	-
	Prci1g3768	517	Gene3D	-	300	515	IPR029057	-
	Prci1g3768	517	CDD	UMPK	98	296	IPR000764	-
	Prci1g3768	517	FunFam	Uridine kinase	300	515	-	-
	Prci1g3768	517	NCBIfam	uridine kinase	94	297	IPR000764	-
	Prci1g3768	517	Pfam	Uracil phosphoribosyltransferase	313	515	-	-
	Prci1g3768	517	SUPERFAMILY	PRTase-like	299	516	IPR029057	-
	Prci1g3768	517	CDD	PRTases_typeI	373	488	IPR000836	-
	Prci1g3768	517	FunFam	Uridine kinase	93	299	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g3768	Prci-Chr1	53907088	53913029	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g3768	35	517	PRT Gene Family	AT3G27190	81.988	0.0	813

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g3768	K00876		-	qsa:O6P43_008817	832.402