Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3762 ATGGCGGGAGAGGAGACGCTCAAGCAAAGCACATCTCCGTGCCCGTATTCTGCCGCTACTTCTCCTTCTCTTTCAGGGAAAGAGGATGATCCGAACCAAAAGTGCTGGAGGAAGCAAGCGGACGAGAATCTCAAGAGGCTCCACTCTCTTCTCTTTGGGACCGATCTTGCCATTGATAAACAAGATTTTGAGTCGGCATACATCCTCGGGCTTCGCCTCATCGGCTTTCTTGACTCTCATTGCCATTCCGATGTCGATGAAGCCTATACACGTCCAATTCGCCAGGAAGTCTTGAGGAAAATCGGCACCGCTCGTCGATCCCTCATTCCAGACTCCGATCGCCAAGCGTTTGAACAAGCAAAAAAGCCTCCAGGGTGTATTTTTGGCAAAACAGGAGATGTTGACATTGGGAAAATTAAGAAGTCGAAGTACTTCCAAGCTCTACTCAAGGAATCCAAAGAAAAGGTGGAGAATTGGTTGGGTGACCATCTGGAGAAGCAAGACAAAGAAGGCAGCAAAATACCAAAAGAATTGTTGCAAACGAAGTTGACATCAATGCGTGGGAAAAGTACTTTGAGGGGAAGTAGTTCAAAATTGAGTTTGAAACATAACAGATCTGAGGACTGCATGATTGTTGAAAAGCCTCTGTCACATGGTGGCCACAGTAAGGGTCATCTTGTCTCTTCCTTCTTGAAAACTGAAGGGGAAGAAAAAACTTCTGGAACTTTGGGAACAAAGCGTGTGCACATGGAAACTAATAGCCCCCAAGTTTGTAATGTCAAGTCACCTTTAAGCAATGGGGAAGCGAAGTCTGATACTTGTGGCAGTGGGTTTGTTACTGCCAGAGCTAAATTGGAAATGGAAACAAGGCAGAGGCGGGAAGGGATTGGTTCACCTACTGCATCTGTCTCACAATATGATAACAATTCTTTGAATCGGGTGTATGGTGGGAGATCATATGGTGTTTCACGACGTGGCCTCCGTGGTAATTTTGTACCTCCTATCAAATCCAATGGAACTGGCGATGGAAATATTACATCAAGAATTGCAGGAAAATGTGATGATACTTTAGATGACTCCACAAAGAGATGTTTGGAAGGGCTATGTGGTCCTGACGGAGAGCTTCCTGAGAAATTGAGGAATATAGAACCTCGCCTTATTGAACATGTTAGCAATGAGATTATGGATAGAGATCCTAATGTCCGGTGGGATGACATTGCGGGATTGGAGCATGCCAAGAAATGTGTCACTGAGATGGTCATATGGCCTCTGCTACGTCCTGATATATTTAAGGGATGCCGCTCTCCTGGGCGAGGTCTACTTTTATTTGGTCCACCAGGAACTGGTAAAACGATGATAGGAAAAGCCATTGCAGGTGAGGCAAAAGCAACCTTCTTTTACATATCGGCGAGTTCATTGACAAGCAAGTGGATTGGAGAAGGTGAAAAACTAGTGAGAGCCCTTTTTGGAGTTGCCAGTTGTCGCCAGCCAGCTGTAATATTTGTCGATGAAATAGATTCTCTCCTATCTCAGCGCAAGTCAGAGGGTGAACATGAATCAAGCAGAAGGCTAAAGACACAATTTCTCATTGAAATGGAGGGTTTTGACAGTGGTAACGAGCAGGTTCTTCTTATAGGGGCCACCAATCGTCCTCAAGAGCTTGATGAAGCGGCACGAAGGCGACTTACCAAAAGACTTTATATCCCCCTGCCATCCTCAGAGGCAAGAGCCTGGATTGTACGTAACCTCCTGGAGAAGGACGGACTTCTCAAGCTGTCAAAGGAAGAGATTGATACCATATGCAACAAAACGGAAGGATATTCGGGATCAGACATGAAAAATTTAGTGAAGGATGCTTCAATGGGTCCCCTAAGAGAGGCTTTAAGGCAGGGCATAGAAATTACTAAGCTGAACAAGGAAGATATGCGGCCAGTAACCCTTCAGGACTTCATATATGCCCTAAAAGAGGTGAGGCAATCTGTTTCCTCAGATGAACTTGGCGCTTACGACTTGTGGAACAAACAATTTGGAAGCCTATCATCGGATAAGGAGAGGCCCTAG 2061 0.4546 MAGEETLKQSTSPCPYSAATSPSLSGKEDDPNQKCWRKQADENLKRLHSLLFGTDLAIDKQDFESAYILGLRLIGFLDSHCHSDVDEAYTRPIRQEVLRKIGTARRSLIPDSDRQAFEQAKKPPGCIFGKTGDVDIGKIKKSKYFQALLKESKEKVENWLGDHLEKQDKEGSKIPKELLQTKLTSMRGKSTLRAXSSSKLSLKHNRSEDCMIVEKPLSHGGHSKGHLVSSFLKTEGEEKTSGTLGTKRVHMETNSPQVCNVKSPLSNGEAKSDTCGSGFVTARAKLEMETRQRREGIGSPTASVSQYDNNSLNRVYGGRSYGVSRRGLRGNFVPPIKSNGTGDGNITSRIAGKCDDTLDDSTKRCLEGLCGPDGELPEKLRNIEPRLIEHVSNEIMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRRLKTQFLIEMEGFDSGNEQVLLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIVRNLLEKDGLLKLSKEEIDTICNKTEGYSGSDMKNLVKDASMGPLREALRQGIEITKLNKEDMRPVTLQDFIYALKEVRQSVSSDELGAYDLWNKQFGSLSSDKERP 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3762 687 PANTHER AAA DOMAIN-CONTAINING 187 679 - -
Prci1g3762 687 SMART AAA_5 437 573 IPR003593 GO:0016887
Prci1g3762 687 MobiDBLite consensus disorder prediction 1 34 - -
Prci1g3762 687 Gene3D - 400 674 IPR027417 -
Prci1g3762 687 Pfam AAA+ lid domain 598 643 IPR041569 -
Prci1g3762 687 Pfam ATPase family associated with various cellular activities (AAA) 441 571 IPR003959 GO:0005524|GO:0016887
Prci1g3762 687 Gene3D - 572 658 - -
Prci1g3762 687 ProSitePatterns AAA-protein family signature. 543 562 IPR003960 GO:0005524|GO:0016887
Prci1g3762 687 FunFam Fidgetin-like 1 400 582 - -
Prci1g3762 687 MobiDBLite consensus disorder prediction 1 28 - -
Prci1g3762 687 Pfam Vps4 C terminal oligomerisation domain 644 678 IPR015415 -
Prci1g3762 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 677 IPR027417 -
Prci1g3762 687 FunFam Fidgetin like 1 572 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3762 Prci-Chr1 53862636 53868960 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3762 437 642 Calmodulin-binding Proteins AT3G56690 34.615 6.47e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3762 K22766 - qsa:O6P43_004816 974.541