Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3742 ATGGAGAACTACCCCGTCTTATTTCCTTGTCCTAATCCTTCGAGTTATTCTGCGTCCGGGAGTGCCATGGGAAGCTCTCATCAGCTTCTTGGTCTGAGCAATAATATTAACTTGGAGGCTCAGATTAACTCGAGTGGGTTCCTGGGATTGAGGCCCGCGGAGAGTGATGATCACGAAAAGTTGCAGACACTGAGAGGAGATGAAAGCGTGTTGAGGAGCAGGGACGATCGGGGTGGTTCCGGGAAGAAGAAGGGAGAGAAGAAAGTGAGGAAGCCCAGGTATGCTTTCCAAACAAGGAGTCAGGTGGATATACTCGATGATGGCTATCGGTGGAGAAAATATGGCCAGAAAGCTGTCAAAAACAACAAATTCCCCAGGAGCTACTACAGGTGTACGCATCAAGGATGCAATGTGAAGAAACAAGTGCAACGGCTAACGAAAGACGAGGGCGTAGTGGTGACCACGTACGAGGGAGAGCACAACCATCCCATCGAGAAGACTACCGACAACTTCGAACACATTTTGAGTCAGATGCAAATATACACTCCCTTTTAG 555 0.4865 MENYPVLFPCPNPSSYSASGSAMGSSHQLLGLSNNINLEAQINSSGFLGLRPAESDDHEKLQTLRGDESVLRSRDDRGGSGKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGEHNHPIEKTTDNFEHILSQMQIYTPF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3742 184 Pfam WRKY DNA -binding domain 106 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1g3742 184 Gene3D WRKY domain 90 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1g3742 184 MobiDBLite consensus disorder prediction 54 83 - -
Prci1g3742 184 SMART WRKY_cls 105 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1g3742 184 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 29 167 IPR044810 GO:0003700
Prci1g3742 184 FunFam WRKY transcription factor 57 91 165 - -
Prci1g3742 184 ProSiteProfiles WRKY domain profile. 100 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1g3742 184 MobiDBLite consensus disorder prediction 54 90 - -
Prci1g3742 184 SUPERFAMILY WRKY DNA-binding domain 97 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3742 Prci-Chr1 53737138 53738985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3742 47 184 WRKY Transcription Factor Family AT5G13080 65.942 2.00e-58 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci1g3742 WRKY 5.6e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3742 - - pvu:PHAVU_001G088200g 239.58