Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3735 ATGGCGAGCTCACCCGCCGGACTGCGGATGCTGAAGCCACCGCTTACAGCTGCTCCTGTGTCGCGCTCGCATTCCAGGTTAAACTTTCCAAAAACTCGATTTCTCAGAGTCACGTGTGATTACTCGTGCTTAGAGGTTAGAGATGTCAGCTATCAGCCCCCAGGGACTCAGTTGAGCCTTTTGAAGTCAATTAATTTTTCACTTCGTGAGAAAAGTTTTGGCCTAATTTTTGGACAGAGTGGAAGTGGAAAAACAACTCTCTTGCAGCTTCTGGCAGGGATAACCAAACCAACCTCTGGTTCCATTTGCATCCAAAAATATGATAGTGATGGTAAGCCAAGCCAATCTCCCCAACCATTGGTGCCAGAAAGGGTTGGTATTGTCTTCCAGTTTCCTGAGAGGTACTTTGTGGCTAATAATGTGCTTGACGAAGTCACTTTTGGGTGGCCAAGACAAAAGGGTGACTATCAATTAAAGGAGCATCTTGCTTTAAGACTTCAGAGGGCAATTAACTGGGTTGGATTAAGTGGGATCTCCTTGGATAAAGATCCTCACTCCCTTAGTGGTGGTTACAAACGTCGTCTAGCATTGGCAATACAGTTGGTTCATATCCCTGATGTTTTGGTACTAGATGAGCCTCTTGCTGGTCTTGATTGGAAAGCACGTGCAGATGTTGTGAAGCTTTTGAAGCATCTGAAAAAAGAATTGACCATACTAGTTGTGAGCCATGATTTAAGAGAGTTAACAAGTCTAGCTGATCGATCGTGGAGGATGGAAATAGGTGGCAATCTTAGGGAGGAGCCACTACCATTGTAA 816 0.4498 MASSPAGLRMLKPPLTAAPVSRSHSRLNFPKTRFLRVTCDYSCLEVRDVSYQPPGTQLSLLKSINFSLREKSFGLIFGQSGSGKTTLLQLLAGITKPTSGSICIQKYDSDGKPSQSPQPLVPERVGIVFQFPERYFVANNVLDEVTFGWPRQKGDYQLKEHLALRLQRAINWVGLSGISLDKDPHSLSGGYKRRLALAIQLVHIPDVLVLDEPLAGLDWKARADVVKLLKHLKKELTILVVSHDLRELTSLADRSWRMEIGGNLREEPLPL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3735 271 PANTHER HEAVY METAL TRANSPORTER 43 268 - -
Prci1g3735 271 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 271 IPR003439 GO:0005524
Prci1g3735 271 CDD ABC_cobalt_CbiO_domain1 45 261 IPR015856 GO:0005524|GO:0016020|GO:0055085
Prci1g3735 271 FunFam ABC transporter I family member 11 chloroplastic 33 269 - -
Prci1g3735 271 Pfam ABC transporter 61 214 IPR003439 GO:0005524
Prci1g3735 271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 259 IPR027417 -
Prci1g3735 271 SMART AAA_5 70 262 IPR003593 GO:0016887
Prci1g3735 271 Gene3D - 36 268 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3735 Prci-Chr1 53711515 53719708 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3735 44 248 Calmodulin-binding Proteins AT2G36910 24.057 7.50e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3735 - - qsa:O6P43_025923 423.705