Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3732 ATGGATCCCAAGGGCTCAAAGCAATCGCAGGAGGTACCCAAGTTCTTGAGTCTCCCACAGCCCCAAGCGAACATCATGGGAGAGAACAAGCCGGCTGAAATCAAGGATTTCCAGATTGCGATTGCGGATAAAGAAGACAATAACAAGAAGCAGCTAGCGCCCAAGAGGAGCTCCAACAAAGACAGGCACACCAAAGTAGAAGGCAGAGGAAGGAGGATAAGGATGCCGGCGCTGTGTGCCGCTAGAATCTTCCAATTGACCAGAGAGTTGGGTCACAAATCTGACGGCGAAACCATTCAGTGGCTTCTCCAGCAGGCGGAGCCGTCGATCATCGCAGCCACCGGAAGCGGCACGATTCCCGCATCAGCTTTAGCTGCCGCAGGCGGCTCTGTTTCGCAACAGGGCACTTCTCTGTCTGCAGGATTGCATCAGAAAATTGATGAATATGGGGGGTCCAATATTGGGTCGGGCAGTAGGACCGGGTGGGCTATGGTGGGCGGAAATCTGGGGAGACCCCATATGGCTACTGGTCTATGGCCCCCAGTTAGTGGGTTCGGGTTTCAGTCATCATCGGGTCCATCCACACCAAGTCTTGGAAGCGAGAGTTCAAATTACCTGCAAAAGATTGGGTTCCCTGGGTTTGACTTGCCTGCGGCAGCAACGAACATGGGTGCCATGAGTTTCACCTCAATTTTGGGCGGGGCTAACCAGCAAATGCCCGGGTTGGAGCTTGGTTTGTCTCAGGATGGTCATATCGGTGTTCTGAACTCACAAGCCTTGTCCCAGATTTATCAGCAGATGGGTCAGGCTAGAGTACACCAGCAGCAGCAGAATCAGCATCAGCATCAGCAGACTCCTGCCAAGGATGATTCTCAAGGCTCTGGACAGTGA 891 0.5331 MDPKGSKQSQEVPKFLSLPQPQANIMGENKPAEIKDFQIAIADKEDNNKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALAAAGGSVSQQGTSLSAGLHQKIDEYGGSNIGSGSRTGWAMVGGNLGRPHMATGLWPPVSGFGFQSSSGPSTPSLGSESSNYLQKIGFPGFDLPAAATNMGAMSFTSILGGANQQMPGLELGLSQDGHIGVLNSQALSQIYQQMGQARVHQQQQNQHQHQQTPAKDDSQGSGQ 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3732 296 Pfam TCP family transcription factor 58 153 IPR017887 -
Prci1g3732 296 ProSiteProfiles TCP domain profile. 59 113 IPR017887 -
Prci1g3732 296 MobiDBLite consensus disorder prediction 1 30 - -
Prci1g3732 296 MobiDBLite consensus disorder prediction 43 68 - -
Prci1g3732 296 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 30 231 IPR005333 GO:0003700
Prci1g3732 296 MobiDBLite consensus disorder prediction 266 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3732 Prci-Chr1 53680135 53682952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3732 1 296 TCP Transcription Factor Family AT3G27010 56.442 4.70e-91 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Prci1g3732 TCP 6.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3732 - - vvi:100253170 475.322