Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3726 ATGGAGAGAGCTAATGGCAACGGTTTCCAACTTAGCGTGAAGCTAAACGAACCAGTTCTAGTTACTCCTGCAGAGAAAACACCCAAAGGCATGTATTTCCTGTCTAACCTTGATCAGAACATTGCAGTGACTGTTCGAACTATTTATTGCTTCAAATCGCCTGAGAAGGGGAATGACAAGGCAGGGGAAGTGATCAAGAACGCTTTGAAGGAGGTTCTGGTTCACTACTACCCACTTGCTGGGAGGCTGAACATAAGCACAGAGGGTAAGCTCATAGTGGACTGCACTGGGGAGGGTGCCTTATTTGTGGAGGCCGAAGCAAACTTGGCAATGGAAGAGATTGGTGACATAACAAAGTCAGAACCTGGGACTCTCGGCAAGCTTGTTTATGACGTTCCGGGTGCAAAACACATCCTTCAGATGCCTCCTTTGGTTGCTCAGGTGACCAAGTTCAAATGTGGAGGATTTGTTCTTGGACTGTGCATGAATCACTGTATGTTTGATGGCATTGGTGCTATGGAGTTTGTGAACTCTTGGGGTGAAGTAGCCAGGGGCCAGCCAGTGTCAATCCCCCCATTTCTGGATAGAAGCATTCTCAAGGCACGGAACCCACCTCAGATAGAGTACCAGCACGAAGAATTTGCTGACATTGAAGACAAGTCAGGATCTAAGGACCTATACGAAGATGAGATGGTCTACAGGTCCTTCTGTTTTGATCCTGAGAAGCTGAAGCAACTGAAGATGAAAGCCATGGAAGATGGGGTTCTTGAGTCCTGCACGACTTTTGAAGTCCTCTCAGCATTCGTCTGGGTGGCTCGAACCAAGGCACTAAAATTGTTGCCAGACCAGCAGACTAAGCTCCTCTTTGCTGTCGATGGAAGGGCCAAGTTTAACCCTCCTCTACCAAAAGGGTACTGCGGTAATGGAATAGTACTGACCAATTCTGTTTGCCAAGCAGTTCAGCTATCAGAAAATCCTCTCTCATTTGCTGTGAACCTAATTAAAGATGCTATCAAGATGGTCACAGACAATTACATGAGATCAGCTATAGATTATTTTGAGGTGACAAGAGCTAGGCCATCTCTGGCTTGTACCCTTTTGATCACAACTTGGTCTAGGCTTTCGTTCCACACCACTGATTTTGGATGGGGAGAGCCTGTTCTTTCAGGGCCAGTGTCTTTGCCAGAGAAGGAAGTGATTTTGTTTCTTTCTCATGGGATAGAGAGGAAAAACATCAATGTGCTTCTTGGTTTGCCAGCTCCTGCAATGAAGATCTTCCAAGAGTTGATGCAGATATAG 1299 0.4619 MERANGNGFQLSVKLNEPVLVTPAEKTPKGMYFLSNLDQNIAVTVRTIYCFKSPEKGNDKAGEVIKNALKEVLVHYYPLAGRLNISTEGKLIVDCTGEGALFVEAEANLAMEEIGDITKSEPGTLGKLVYDVPGAKHILQMPPLVAQVTKFKCGGFVLGLCMNHCMFDGIGAMEFVNSWGEVARGQPVSIPPFLDRSILKARNPPQIEYQHEEFADIEDKSGSKDLYEDEMVYRSFCFDPEKLKQLKMKAMEDGVLESCTTFEVLSAFVWVARTKALKLLPDQQTKLLFAVDGRAKFNPPLPKGYCGNGIVLTNSVCQAVQLSENPLSFAVNLIKDAIKMVTDNYMRSAIDYFEVTRARPSLACTLLITTWSRLSFHTTDFGWGEPVLSGPVSLPEKEVILFLSHGIERKNINVLLGLPAPAMKIFQELMQI 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3726 432 FunFam Spermidine hydroxycinnamoyl transferase 11 214 - -
Prci1g3726 432 Gene3D - 214 431 IPR023213 -
Prci1g3726 432 Gene3D - 8 213 IPR023213 -
Prci1g3726 432 FunFam Tryptamine hydroxycinnamoyl transferase 218 431 - -
Prci1g3726 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 429 - -
Prci1g3726 432 Pfam Transferase family 13 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3726 Prci-Chr1 53607189 53609234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3726 11 430 Monolignol Biosynthesis Gene Families AT5G48930 34.642 7.21e-84 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3726 K15400 - gmx:100804504 756.518