Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3724 ATGATTATTAATTACAGCACTGCATCACACACTATTTGTTCGCCGGGGAGGGACGCAGAGGAAAAGCCGCAGGAGGGAACCGCATCCGTGTTGCGGAGGAAGAAGCAAGACTCCGTCATTGTTCACTGTCCCTCAAGAGTGAGAATTCATGCAACAAATCCAGCCCACTTCTTCAAACGACTCGGGTTTGCAGTCCAAGAAAATGCTGCCCAGTCTTCTGAACATTTAGAGCAGACTAATCTAACCCCTCCCAGCTTAAACCTTCCTGCGTTCAAATTTGACTTGGATGGGGATGTGGAAGTCCAGTCACCAGATAGTTCCATGTGGGAGTCTTTCTTCTCCGATCAGTTAGACGCCGATTTCATGATCTCTTCGCCGGTGAGGAGCATGCCTTCCCCTCAAGCTTCTACCTACAACTGCAACTACAACTATGCTCAGGCAATGCAGGGACAGAGTCTCTCAGGTTGTTCACCTCCGCGCTTCTCATCGCAGATCGGAGCACTTGCCAGCGCCCACAAAGGTAAAGGACTCAGTCCCCTCCATAGGGTAAACTCTCCAAACAACCAGTATATACAGCCCGTGGAGAACCTTTCACTTCGGACCATAGAAGAATTCTTGGGGGACTATCAAGGGGATCATGGACTCGCTGGTGGATATTCATCCACTAAACTGTCTGATATTGGAAGTTCATCAGACTGCTTTGACATATCAGCTTCAATCCCGCCCATTTTGGACAGCTTGACGATGGCAAGTTCTTCAAGATACTGTGGATCATTGAACGAAGAATCTTTAATGCCGGATGGCTCTCAATCCGAAGAGAGTGACGTGCATCAGATGAGCGCATCTCTTTCACAAGCTCTGCAGCAAGAACGCCAGCAAGAGAAACAGCAAAAGCAGCAATCGGAACAGCAATCACACTCACAGCCACATAGCTTGATGGTGCCTATTCCTATAGGGACCGAGCAGGAGCAAGACAGTGGACTTCAACTGGTGCACCTGCTATTAGCCTGTGCTGAGGCAGTGGCCAAAGAAGAATACATGTTGGCAAGAAGGTACTTGCACCATCTGAATCGTGTAGTAACACCTCTTGGTGACTCCATGCAACGAGTCGCGTCCTGTTTCACCGAAGCCTTGAGCGCAAGACTCGCAGCCACTCTCACCACCAAATCCATCATCAACTCCTCCAACCCTAAGCCATCCTTCTCTGGTTTCCCGCAACACTCCATAGAAATCCTCAAGATATACCAAATCGTCTACCAAGCTTGCCCTTACATCAAATTCGCCCACTTCACCGCAAACCAAGCAATCTTCGAAGCATTCGAGGCCGAAGAGAGAGTGCACATAATCGACCTAGACATCCTCCAAGGTTACCAATGGCCCGCGTTCATGCAAGCACTAGCAGCCCGACCCAGTGGAGCCCCGTTTCTCCTGCGAATAACTGGCGTCGGGCCCAGCATCGAGGCCGTGAGGGAAACGGGCCGGTGCTTGACGGAGCTAGCCCACTCTCTCAACATCCCCTTTGAATTCCACCCGGTGGGCGAGCAACTAGAAGATCTCAAGCCCCACATGTTCAACCGTCGGGTCGGAGAGGCATTGGCGGTGAACTCCGTGAATCGGCTTCACAGGGTCCCAGGAAACTGCATGGGAAATTTACGAATAATAAGGGACCAAGCCCCCAACATCGTAACCCTTGTGGAGCAAGAAGCGAGTCATAACGGACCGTATTTCCTGGGCAGATTTCTGGAGGCACTGCATTATTACTCAGCGATTTTCGATTCTCTGGACGCGACGTTTCCGCCGGAGTCGGCGCAGAGGGCTAAGGTGGAGCAGTATATATTTGCGCCAGAAATAAGGAACATAGTGGCCTGTGAAGGAGCGGAGAGGATCGAGAGGCACGAGAGGTTGGAGAAATGGAGGAAGATAATGGAAGGGAGAGGGTTCAGGGGGGTGCCACTGAGTCCGAACGCGGTGACTCAGTCGAAGATATTGCTGGGTTTGTATTCGTGCGATGGATATAGGTTGACGGAGGACAAAGGTTGCTTGCTACTGGGATGGCAAGACCGAGCCCTAATTGCTGCATCTGCATGGCGATGCTGA 2097 0.5117 MIINYSTASHTICSPGRDAEEKPQEGTASVLRRKKQDSVIVHCPSRVRIHATNPAHFFKRLGFAVQENAAQSSEHLEQTNLTPPSLNLPAFKFDLDGDVEVQSPDSSMWESFFSDQLDADFMISSPVRSMPSPQASTYNCNYNYAQAMQGQSLSGCSPPRFSSQIGALASAHKGKGLSPLHRVXNSPNNQYIQPVENLSLRTIEEFLGDYQGDHGLAGGYSSTKLSDIGSSSDCFDISASIPPILDSLTMASSSRYCGSLNEESLMPDGSQLXEESDVHQMSASLSQALQQERQQEKQQKQQSEQQSHSQPHSLMVPIPIGTEQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVASCFTEALSARLAATLTTKSIINSSNPKPSFSGFPQHSIEILKIYQIVYQACPYIKFAHFTANQAIFEAFEAEERVHIIDLDILQGYQWPAFMQALAARPSGAPFLLRITGVGPSIEAVRETGRCLTELAHSLNIPFEFHPVGEQLEDLKPHMFNRRVGEALAVNSVNRLHRVPGNCMGNLLXIIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPESAQRAKVEQYIFAPEIRNIVACEGAERIERHERLEKWRKIMEGRGFRGVPLSPNAVTQSKILLGLYSCDGYRLTEDKGCLLLGWQDRALIAASAWRC 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3724 701 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 290 696 IPR005202 -
Prci1g3724 701 Pfam GRAS domain family 332 700 IPR005202 -
Prci1g3724 701 Coils Coil 282 306 - -
Prci1g3724 701 ProSiteProfiles GRAS family profile. 323 700 IPR005202 -
Prci1g3724 701 MobiDBLite consensus disorder prediction 275 313 - -
Prci1g3724 701 MobiDBLite consensus disorder prediction 259 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3724 Prci-Chr1 53593402 53597486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3724 326 701 GRAS Transcription Factor Family AT1G66350 45.288 4.02e-99 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci1g3724 GRAS 2.7e-132 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3724 - - pcin:129302477 1341.25