Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3714 ATGGAGAAAAAGCTTGCCGAAAATTCTGACAAAGACGAGGAGAACAACGCCGGCGAGACGCCTCATCATGCATCATTGGAACCAAGGAATCCCGACGATGATAACATTGCCAAACACGATGATCATGCTAAGGCGGACTCTGCTACAGAGGGAGAGGCCACAGATGAGGTGCCTAAGTGTCCTCTCAACCTCGGCAAGCTTTCGGCAGACGTGGATTCATGGGTTGTTGAGAGTATGCTGCACCAGAATGCAGATATCACGGAGATCCCTGATTGCGTTGATAAGTTCTTGGATCTCGTCGAAGAAAATATTGTCACGTACGACGCGGGAGAAGGCAGAACGAGATGGGGCGAGGTGCCGGAGCAAGATTCTTCCTTCCTGGAATCTGTGAATCGGATTTATAAGCTCTCCAAGATGCTGAGTCAGTCGCAATGTTCCTCGCAGCATGTCAACGAACGGAAAGATTCGTTGGTCAACCGCATCGGGGTCATGCGACAGGGGGCCATGTCGTATTTGGAGGAGGTGCTCCGGGTGCTCATGGAAGAATATCGAAATCAATATAAAGGAGAATTCGAGTCGACTGGTTATGATCCGAAAGGGAAGCAGGTAGAGCATGACCCTTGCGCACCGCCGGACTCTGAGCATTCGGATTTTCCGGGTTATTCTGAGGACACCATAACCAGTTTGAACAAGATAGCCAGGGAGATGATATTGTCTGGATATGAATCTGAATGTTGCCAAGTTTATATTATTTCAAGGAGAAATGCATTTGAAGAGAGACTGCATAAGTTAGGGTTCGAGAAAATCAGCATTGATGAGATTCAGAAACTGCCATGGGAATCGTTAGAGAAAGAGATTCCTACGTGGGTTACAACCTTCAAGGAATGCGCCTGTAACTACTTCCCCGGCGAACTGAAGCTCGTGGAATCCGTGTTTAAAGAACACCCGTCGGTAGGGGCTGGCCTCTACAGCAATCTAACTCGTGGCGTCGTCATACAGCTTCTCAATTTCGCAGAAGGAGTAGCCATGACGAAGCGCTCCGCCGAGAAGCTATTCAAATTCCTCGACATGTGCGAGACCTTGGGGGTGGTGATTTCCGCCTTGAACCGTTTACTCACGGAAGAGCGTGGTGGTGAGCTCAAGGCCGAGACGGCGTCGGCGAGAAGTAGACTCGGAGAGGCCGCGATAAGCATATTCTGTGACCTAGAGAATTCGATCAAAGCGGAAGCGGGAAAAACTGCGGTTCCCGGCGGAGCGGTTCACCCACTGACTCGCTACGTCATGAACTATCTCCCGTACGCTTGCGAGTACAAGGACACCTTAGAGCAGGTTTTCAAGGAGCACGCAAAGCTTCAGGGCGCTGACCCAACCAGGGGATCACACCAGAATCATCAGGAGAGTGATCGAGACGACGGCAAGGAGGAGTCGCCGTTCGCAGAGCAGGTGATGAGGGTGATGGAATTGCTGGACGCAAGTCTCGAAGGGAAGGCGAAGCTGTACAAGGACGTGTCATTGGGTTGCATCTTCATGATGAACAACGGCAGGTACATACTGCAGAAGATCAAAGGGTCGTCGGAGATATACCAACTGTTGGGGAACACGTGGTGTCGGAAGAAGTCTTCGGATCTAAGGGCGCAGCATAAGAACTACCAGAGGGAATCATGGAGTAAGATATTGCGTTGTCTAAACCCTGAAGGTTTGACCGTGAACGGAAAAGTGCAGAAGCCAATTCTGAAGGAGAGGTTCAAGAGCTTCAATACAATGTTCGATGAGGTACACAAGACGCAAAACTCGTGGATTGTGAACGACGAGCAGCTTCAGTCAGAGCTGAGGGTTTCGGTAGCTGGGCTGGTCATTCCAGCGTACAGAGCGTTCGTGGGGAGGTTTTCTCAGAATTTGACTGCGGGGAGACAAACAGAGAAGTATATAAAGTACCAGCCTGAGGATATAGAGACTTACATCGATGACCTCTTTTCTGGGAATCCCCAGTTCATGTCTAAAAGGAAACTAGTGTAA 2016 0.4995 MEKKLAENSDKDEENNAGETPHHASLEPRNPDDDNIAKHDDHAKADSATEGEATDEVPKCPLNLGKLSADVDSWVVESMLHQNADITEIPDCVDKFLDLVEENIVTYDAGEGRTRWGEVPEQDSSFLESVNRIYKLSKMLSQSQCSSQHVNERKDSLVNRIGVMRQGAMSYLEEVLRVLMEEYRNQYKGEFESTGYDPKGKQVEHDPCAPPDSEHSDFPGYSEDTITSLNKIAREMILSGYESECCQVYIISRRNAFEERLHKLGFEKISIDEIQKLPWESLEKEIPTWVTTFKECACNYFPGELKLVESVFKEHPSVGAGLYSNLTRGVVIQLLNFAEGVAMTKRSAEKLFKFLDMCETLGVVISALNRLLTEERGGELKAETASARSRLGEAAISIFCDLENSIKAEAGKTAVPGGAVHPLTRYVMNYLPYACEYKDTLEQVFKEHAKLQGADPTRGSHQNHQESDRDDGKEESPFAEQVMRVMELLDASLEGKAKLYKDVSLGCIFMMNNGRYILQKIKGSSEIYQLLGNTWCRKKSSDLRAQHKNYQRESWSKILRCLNPEGLTVNGKVQKPILKERFKSFNTMFDEVHKTQNSWIVNDEQLQSELRVSVAGLVIPAYRAFVGRFSQNLTAGRQTEKYIKYQPEDIETYIDDLFSGNPQFMSKRKLV 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3714 671 PANTHER EXOCYST COMPLEX PROTEIN EXO70 120 660 IPR004140 GO:0000145|GO:0006887
Prci1g3714 671 MobiDBLite consensus disorder prediction 1 53 - -
Prci1g3714 671 SUPERFAMILY Cullin repeat-like 121 658 IPR016159 -
Prci1g3714 671 MobiDBLite consensus disorder prediction 461 476 - -
Prci1g3714 671 MobiDBLite consensus disorder prediction 193 220 - -
Prci1g3714 671 MobiDBLite consensus disorder prediction 451 476 - -
Prci1g3714 671 Pfam Exo70 exocyst complex subunit 289 656 IPR046364 GO:0000145|GO:0005546|GO:0006887
Prci1g3714 671 Gene3D Exocyst complex component Exo70 112 668 - -
Prci1g3714 671 MobiDBLite consensus disorder prediction 193 212 - -
Prci1g3714 671 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3714 Prci-Chr1 53558949 53561906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3714 23 661 EXO70 exocyst subunit family AT5G13990 49.175 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3714 K07195 - qsa:O6P43_006071 777.319