Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3708 ATGGAGAAGCTCCCCAGCTTTGTCGTCAATGGAGGCATCAAGCTTCCCATTGGGTACAGGTTTTGTCCCACCGATGAAGAGCTTGTCATTCACTACCTCAAGAGGAAGGCCTTCTCTCACCCCTTACCCGCTTCCGTCATTCCTGACTTCCACGTCTTTTCCGCCCACCCTTCCCGCCTTCCAGGCGTCGGTGATCCCAAAGAAAAGAGGTATTTTTTTAGCCATAGAGAGGACCATTTTCACAAGAGGCCTGTTGCTTATGGGTACTGGAAAACCATAGGCAAGGACAAGCAAATTGTTGCTTCTGACAGCAACCAAGTGGTTGGTATGAGGAAAACTCTGGTTTTCTGTGAAGCCAAGCGTCCCCGTGAGGCCCGGATTCAGTGGGTCATGCATGAATTGCGCCTTCTTCCGTCTGAAACATCTTCCAACCCGTCATACCAGATGGCACCGGCAGACTGGGCTGTATACCGCATATTTCAGAAGAGGAAGCTCAAGAGAACAGGATCTAACGGTCGACTCTCTGACACGAGGAAAGTTCAGAGATTAGAGGATGAGAAGATTAAGCCCAGTTTCATAGATTTCACAGTGTTGTATGGGAGTGACACGGGACCTCCCCCACCTGGCTCTCCAAGTTTGAGTGAAGGCAGTGAAATCGCTTCTAACAAGCTAGATTAG 678 0.4971 MEKLPSFVVNGGIKLPIGYRFCPTDEELVIHYLKRKAFSHPLPASVIPDFHVFSAHPSRLPGVGDPKEKRYFFSHREDHFHKRPVAYGYWKTIGKDKQIVASDSNQVVGMRKTLVFCEAKRPREARIQWVMHELRLLPSETSSNPSYQMAPADWAVYRIFQKRKLKRTGSNGRLSDTRKVQRLEDEKIKPSFIDFTVLYGSDTGPPPPGSPSLSEGSEIASNKLD 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3708 225 Gene3D NAC domain 24 167 IPR036093 GO:0003677|GO:0006355
Prci1g3708 225 PANTHER NAC TRANSCRIPTION FACTOR 56 15 169 - -
Prci1g3708 225 MobiDBLite consensus disorder prediction 198 225 - -
Prci1g3708 225 SUPERFAMILY NAC domain 11 162 IPR036093 GO:0003677|GO:0006355
Prci1g3708 225 ProSiteProfiles NAC domain profile. 15 162 IPR003441 GO:0003677|GO:0006355
Prci1g3708 225 Pfam No apical meristem (NAM) protein 16 136 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3708 Prci-Chr1 53510948 53512295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3708 7 164 NAC Transcription Factor Family AT5G13180 48.780 4.27e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci1g3708 NAM 4.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3708 - - qsa:O6P43_009732 224.557