Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3703 ATGGGAGAGCCCGCAGGCATGTACCAGCTCCTGAACCACTCCCCTGCTGCTTCCTCCAGGACCCTCCGCAAGTCTCAGCAGTCCCAGCCCTCGTCGCCTCGCATTTTTCCCTGCCGTTACTGCCCCCGCAAGTTCTGCACCTCCCAGGCACTCGGCGGCCACCAGAACGCCCACAAGCGAGAGAGAGCCGCCGACCGCAACCTCAGCCCCGCCGACGGCCGCCACCCTCCCCAGTCCCGCCACTCCCATTTCTTCGACCCCTACTGGCTCCATGTCGACCCCATTCATTTCTCCCCCCCTGCTCCCCCTCCTTCCTCCTCCTCACCCCCTGCTCCTTCCGATCCTCTCCTCGACCACGTCAACCACCTCGACCTCACCCTTCGCTTATGA 390 0.6487 MGEPAGMYQLLNHSPAASSRTLRKSQQSQPSSPRIFPCRYCPRKFCTSQALGGHQNAHKRERAADRNLSPADGRHPPQSRHSHFFDPYWLHVDPIHFSPPAPPPSSSSPPAPSDPLLDHVNHLDLTLRL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3703 129 MobiDBLite consensus disorder prediction 1 37 - -
Prci1g3703 129 Gene3D Classic Zinc Finger 13 82 - -
Prci1g3703 129 ProSiteProfiles Zinc finger C2H2 type domain profile. 36 63 IPR013087 -
Prci1g3703 129 MobiDBLite consensus disorder prediction 12 34 - -
Prci1g3703 129 MobiDBLite consensus disorder prediction 55 69 - -
Prci1g3703 129 SUPERFAMILY beta-beta-alpha zinc fingers 33 63 IPR036236 -
Prci1g3703 129 MobiDBLite consensus disorder prediction 49 84 - -
Prci1g3703 129 MobiDBLite consensus disorder prediction 96 118 - -
Prci1g3703 129 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 9 67 IPR044246 GO:0009788
Prci1g3703 129 MobiDBLite consensus disorder prediction 96 111 - -
Prci1g3703 129 ProSitePatterns Zinc finger C2H2 type domain signature. 38 58 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3703 Prci-Chr1 53467462 53468211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3703 28 124 C2H2 Transcription Factor Family AT5G14010 43.878 1.24e-16 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci1g3703 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3703 - - pcin:129307163 243.817