Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3657 ATGTCAGGGTCTCTTGCAGCAATAGTAGGAGGAGCTGCAGGGGCCGTGGCATTGGTAGGGATAGTTATAGCACTCTTATGCTTCTGCCTATCTCGCAGGAGGAGTGTCTCAAGGACTTCAGAGACAGGGTCCTCTGATCCTTCCCAAGTGGAAAGACATGGTGGGATTGAGTTGACTTTACGAGATACAAGGCGGTTTGAGATGGATGAACTTTCTCAGGCCACAAAGAATTTCAGTGACAAAAATTTGATCGGAGAAGGCAAGTTTGGGGAGGTTTACAAAGGTTTACTTCATGATGGTATGCTTGTGGCCGTCAAAAAGCGGCATGGACTTCTGAGCCAGGAATTTGTTGACGAGGCTCGCTACCTCTCTTCCATTCATCATCGGAATCTTGTAACTCTTTTGGGCTACTGCCAGGAACAAAATCTGCAGTTTCTTATATACGAATATGTGCCTAATGGGAGCGTCTCTAGTCACTTGTATGGTGCTGGTCAACAATCGAAAGAGAAGCTAGAATTCAAGCTTAGACTTTCAATAGCTCAAGGTGCTGCTACAGGTTTGGCTCACATTCACTCCTTGAGCCCCCGCTTGGTGCATAAGAATTTCAAAACAGCCAATGTTTTGGTGGATGAAAATTTCATTGCTAAGGTTGCCGATGCTGGACTGCGCAATTTCCTGGGAAGAGCTGATATTGCAGGCCCATCTTCTCAAGCCGCAGCCGATGAGATATTCCTTGCCCCCGAGGTTAGAGAGTTCAGACGATTTTCTGAAAAGAGTGATATATACAGTTTTGGGGTATTTTTGTTGGAACTATTAAGTGGGAAGGAAGCAACAGAATCTCCAACTTCAGGCTCTAGCCAGAATCTAGTTGAATGGGTGCAAGCTAATGAAGACCATCGCGTTATGTCTACTATCATTGATCAGAGATTGGGAAGTAGTTTCACAGCAGAAGGCATGGAAGAATTTATCTTGCTAGTGGCTCGATGTTTGAGCCCTTCAAGTGAGAGAAGACCTTCCATGAGTTATGTTGTAATGGAACTTGAGCGGATCCTTGAGAAGGAAATGAAGTTGACAACAATGATGGGTGAAGGCACTCCAACTGTGACCCTCGGAAGTCAGTTATTCAAAGCAACAGGGTAA 1140 0.4518 MSGSLAAIVGGAAGAVALVGIVIALLCFCLSRRRSVSRTSETGSSDPSQVERHGGIELTLRDTRRFEMDELSQATKNFSDKNLIGEGKFGEVYKGLLHDGMLVAVKKRHGLLSQEFVDEARYLSSIHHRNLVTLLGYCQEQNLQFLIYEYVPNGSVSSHLYGAGQQSKEKLEFKLRLSIAQGAATGLAHIHSLSPRLVHKNFKTANVLVDENFIAKVADAGLRNFLGRADIAGPSSQAAADEIFLAPEVREFRRFSEKSDIYSFGVFLLELLSGKEATESPTSGSSQNLVEWVQANEDHRVMSTIIDQRLGSSFTAEGMEEFILLVARCLSPSSERRPSMSYVVMELERILEKEMKLTTMMGEGTPTVTLGSQLFKATG 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3657 379 FunFam Protein kinase superfamily protein 151 364 - -
Prci1g3657 379 FunFam Protein kinase superfamily protein 43 150 - -
Prci1g3657 379 ProSiteProfiles Protein kinase domain profile. 78 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3657 379 Gene3D Transferase(Phosphotransferase) domain 1 151 365 - -
Prci1g3657 379 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Prci1g3657 379 Gene3D Phosphorylase Kinase; domain 1 40 150 - -
Prci1g3657 379 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 14 356 IPR047117 -
Prci1g3657 379 Pfam Protein tyrosine and serine/threonine kinase 82 347 IPR001245 GO:0004672|GO:0006468
Prci1g3657 379 SUPERFAMILY Protein kinase-like (PK-like) 58 355 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3657 Prci-Chr1 53221225 53225366 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3657 66 364 Trihelix Transcription Factor Family AT5G38560 39.159 5.62e-62 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Prci1g3657 PK_Tyr_Ser-Thr 2.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3657 - - gmx:100305436 593.578