Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3627 ATGCTTGGTCCGATAAAGGCCGCGATTGGAGATGCAGTGCTCACCTTTATGTGGGTCTTCTGCGCATCCACGCTTGGATTAGCCACTAGCGCGATAACAGCATCACTTGGTCTTCAGCATCTATCCTTCAATGGTCTTAATTACGCATCAATTTTCGTCACCACTTTCCTTGTCTTTACCCTTGTCTTTATCTTCACCATCGTGGGCAATGTCTTGGGTGGTGCCACCTTCAACCCCACCGGCACTGCTGCCTTTTATGCCGTTGGTCTCGGCTCTGACACCCTTTTCTCCATGGCTCTCCGCTTTCCTGCCCAGGCGTTAGGTGCTGCGGGGGGTGCTTTGGCAATTTTGGAGGTGATACCGCCGAAATACAGGCACATGATTGGAGGACCATCGTTGAAAGTTGATTTGCATACTGGAGCTATGGCTGAAGGGGTTCTGACATTTGTGATCACTCTGGCTGTTCTTTTTATCATACTCAGGGGCCCTCGTAATGAATTGTTGAAGACTTGGTTGCTGGCCGTGTCTACCGTGGTTCTGGTCATGGCTGGCTCTACTTACACGGGGCCCTCCATGAATCCTGCCAATGCCTTTGGCTGGGCATATGTAAACAACTGGCACAATACATGGGACCAATTCTATGTTTACTGGATTTGCCCCTTCATTGGAGCAATAGTTGCTGCTTGGGTGTTTCGGATCTTGTGTCCCCCACCAGCACCAGTAGAGAAACAGAAGAAAGCCTGA 744 0.5013 MLGPIKAAIGDAVLTFMWVFCASTLGLATSAITASLGLQHLSFNGLNYASIFVTTFLVFTLVFIFTIVGNVLGGATFNPTGTAAFYAVGLGSDTLFSMALRFPAQALGAAGGALAILEVIPPKYRHMIGGPSLKVDLHTGAMAEGVLTFVITLAVLFIILRGPRNELLKTWLLAVSTVVLVMAGSTYTGPSMNPANAFGWAYVNNWHNTWDQFYVYWICPFIGAIVAAWVFRILCPPPAPVEKQKKA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3627 247 FunFam Aquaporin SIP1-1 2 247 - -
Prci1g3627 247 SUPERFAMILY Aquaporin-like 5 241 IPR023271 -
Prci1g3627 247 PANTHER AQUAPORIN SIP1-1 3 247 IPR044222 GO:0015250
Prci1g3627 247 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g3627 247 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g3627 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g3627 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g3627 247 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g3627 247 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g3627 247 Gene3D Glycerol uptake facilitator protein. 4 244 IPR023271 -
Prci1g3627 247 Pfam Major intrinsic protein 5 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3627 Prci-Chr1 52995509 52999034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3627 2 247 Major Intrinsic Protein MIP AT5G18290 54.032 4.60e-83 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3627 K09875 - gmx:102669186 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3627 1 52995509 52999034 Prci1g3627 1 52995509 52999034 ECH