Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3605 ATGGCAATTTCACGAACAGGAGTGTACGTTGACGACTATTTGGAGTATGCAAGCACATTGCCTGCTGAACTCCAGAGATTGTTAAACACTATTAGGGAACTCGATGAAAGATCCCAATCTATGATAAACCAGACCAGGCAACGCACTAGGTACTGTTTAGGGTTGTCTTCATATGGCTCTAAGAAGGTTAATCATAATAGTAGCCATATCTATAATAACATTAACACCAACGAAGAAGACGATGCAACAATTGAGAAAATGCATAAAGAGATTGAGGCTAATCAGGATAGTGCTCTAAGTCTGTGCACCGAAAAGGTTTTGTTGGCGCGGCAAGCATATGACCTGATAGATAGCCATATAAAACGACTTGATGAGGATTTGAACAACTTTTCTGAAGATCTAAAGCAAGATGAACCAGCTATTCTCTCCCCCTTGGCTATAGTCCCAAAAAGTGAAAAACGCAAATCCTTATGTGGAGCACCTCTATCAAAGAGACTTGATTACAGGGATAGAGATTGGGATTGGGAGCGTGATAGAGATTTTGAACTTATGCCCCCACCAGGAAGCCATAAGAAGGAGTATGCAACTCCCATGGATATTGATCAACCGATTGATCCGAATGAACCTACATACTGTATCTGTCATCAGGTTTCTTATGGAGATATGATCGCTTGTGACAATGAAAATTGCCAAGGAGGTGAATGGTTCCATTACTCGTGTGTTGGCCTGACTCCCGAAACAAGATTCAAGGGAAAGTGGTATTGTCCTACTTGCAGACCACACTTTCAATGA 792 0.4154 MAISRTGVYVDDYLEYASTLPAELQRLLNTIRELDERSQSMINQTRQRTRYCLGLSSYGSKKVNHNSSHIYNNINTNEEDDATIEKMHKEIEANQDSALSLCTEKVLLARQAYDLIDSHIKRLDEDLNNFSEDLKQDEPAILSPLAIVPKSEKRKSLCGAPLSKRLDYRDRDWDWERDRDFELMPPPGSHKKEYATPMDIDQPIDPNEPTYCICHQVSYGDMIACDNENCQGGEWFHYSCVGLTPETRFKGKWYCPTCRPHFQ 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3605 263 SMART ING_2 9 130 IPR024610 -
Prci1g3605 263 ProSiteProfiles Zinc finger PHD-type profile. 209 261 IPR019787 -
Prci1g3605 263 Pfam PHD-finger 211 260 IPR019787 -
Prci1g3605 263 Coils Coil 24 44 - -
Prci1g3605 263 CDD PHD_ING 211 258 - -
Prci1g3605 263 SMART PHD_3 211 259 IPR001965 -
Prci1g3605 263 CDD ING_plant 17 127 - -
Prci1g3605 263 SUPERFAMILY FYVE/PHD zinc finger 186 260 IPR011011 -
Prci1g3605 263 PANTHER INHIBITOR OF GROWTH PROTEIN 178 259 IPR028651 -
Prci1g3605 263 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 130 IPR024610 -
Prci1g3605 263 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 199 261 IPR013083 -
Prci1g3605 263 Gene3D - 5 128 - -
Prci1g3605 263 FunFam PHD finger protein ING 203 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3605 Prci-Chr1 52862626 52866607 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Prci1g3605 ING 9.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3605 - - lang:109339676 440.654