Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3568 ATGGCAGAAAAAATCCCTCCTTTGAACCTTCTGATTTTTGTGACACTTTTACTTTCTATAAATCATTCAGAGCAACTGCAATCCTCGATGCCCCAGACTCTTCTAAGAATCAAACGGCTTTTGAATTTTCCTTCTGCTTTAAGTAGCTGGAATAGCAGCACAGACTTCTGCAGCCCTGACTCAGATTCTTCTCTTACTGTTGTATGCTATGAAGATGCCATCACCCAGCTTCATATAATAGGTGAAAGGATAGCTTCGCCGCTTCCTAAAAATTTCTCAATAGATTCCTTTGTCGCAACGCTAGCCAGGCTTCCCCATTTGAAAGTCCTCACACTGGTTTCTCTTGGTATCTGGGGTCCACTTCCTGGTAAGATTGCTCGATTGTCATCACTGGAAATAGTTAATATGAGTTCAAATTTTCTATATGGTGTCATCCCTCAGGAGCTTTCGTTACTGTCAAATCTTCAGACACTCATTCTTGATGACAACAAGTTTTCTGGTGAGCTTCCAGATTGGCTTGATTCTCTTCCAGCCTTAACTGTGTTAAGTTTGAAAAATAATTTGTTCAATGGGTCTGTGCCTGATTCCTTGGGTAGCTTGGAAAATTTGAGAATTCTTTCACTTTCTCATAATCACTTCTATGGTGTAGTACCCGATTTAAGGCATTTGACAAATCTTCAAGTGCTGGAATTGGATGATAATGCTTTTGGACCTCTGTTTCCTCGACTTGGTGCCAAGTTGGTTGCTCTTGTACTGAGAAACAATATGTTCAGATCCAGTGTCCCAGCTGAAGTGACCAAGTTTTACCAGCTTGAAAGATTTGATATCTCATCAAATTCATTTGTGGGGCCATTCCACCCTGCATTGTTATCTCTTCCTTCTATCACTTATCTCAACATTTCTAGAAACCAACTCACCGGAATGCTTTTTGAAAACCTAACATGCAGTTCTGAACTCCAAGTTGTGGATCTTTCCTCGAATCTGTTGACTGGAAGCTTACCTGGATGTTTAGAGTCAAAAAGCAATAATAAGACTGTCCTTTATGCTAGAAATTGTCTGCAAGACATGAACCAAAATCAGCATCTACTTCCCTTTTGTCATACTGAGGCCTTAGCTGTGGGAATATTACCCGAGAGTAAGAAACGCAAGGATCAATCAAAGGTTGGCCTTTCTCTTGGGATAGTGGGCGGGATTCTTGGAGGAGTAGCGCTTCTTGCCTTGGTTTTTTTCATTATTAGAAGAGGAAATGTCAGAAGCAACGTTAAGAATCCCCCAACTAGATTAATGTCTGAGAGTGAAACTCCTAAATACCCATCTAAGCATCTTTCTGATGCAAGATACATATCTCAAACAATGAAGTTGGCAACAGTAGGCCTGCCAAGTTATCGAACTTTCTCTCTGGAAGAAATTGTGGCAGCTACAAACAACTTTGACACATCTTCGTTCATGGGTGAAAGTTCTCAGGGACAGATGTATAGAGGCCGGCTGAGGGATGGTTTTCTTGTTGCTATAAGATGCGTGAAAATGAAAAAAAGATACAGCATTCATAACTTTATGCACCTCATAGAACTGATATCACAACTCCGGCATCGTCATTTAGTCTGTGCCCTAGGACACTGCTTTGAATATTATTTAGAAGATTCAACTGTCAGCAGACTATTTCTTGTCTTCGAATATGTGCCAAATGGCACACTCAAGAGCTGGATATCAGCAGATGGGAGGTCAAGAAAATCACTTGGGTGGACCCAGCGCATAGAAGCTGCAATTGGAGTAGCAAAGGGTATCCAGTATTTACACACAGGAATTGTCCCTGGTGTATATTCAAACAATCTCAAGACAACAGATGTATTGCTGGATCAGAATCTTGGTGCAAAAATCTGCAGTTATAACCTGCCCTTTTTATCTGACATCAGAAAGGTTGGGCACGGAGCTTCCTCCAGTGGGTCAAAAAGTCCTGGCGTTAATAAAAGCGCAAAACATGAAGATAAGTCAGATATCTACGACTTTGGAGCAATACTACAGGAAGTGATTCTGGGAAGGGCAGCAAAGTCAAGGAATGAAGCGGATGGCTTAAGGGTTCTGTTTCATGCGAGCATAGTAGGTGATGAGGAAGCTAGAAGGAGCATTGTAGATGCTGGAGTTCGCAAGTCATGCTTGGATCAATCGTTGAAGACGATGATGGAGATATGTGCGAGGTGCCTGGCCAAAGATCCAGCAGAAAGGCCTTCCATCGAGGATGTTTTGTGGAACCTGCAGTTTGCCGCTCAGGTTCAGGATGCATGGCGAGGGGAATCTCAAAGCAGTGAGGGGTCTCCAGTCTCACCTTTTGAACCTCGACGACTCACCTTTCATTAG 2355 0.4234 MAEKIPPLNLLIFVTLLLSINHSEQLQSSMPQTLLRIKRLLNFPSALSSWNSSTDFCSPDSDSSLTVVCYEDAITQLHIIGERIASPLPKNFSIDSFVATLARLPHLKVLTLVSLGIWGPLPGKIARLSSLEIVNMSSNFLYGVIPQELSLLSNLQTLILDDNKFSGELPDWLDSLPALTVLSLKNNLFNGSVPDSLGSLENLRILSLSHNHFYGVVPDLRHLTNLQVLELDDNAFGPLFPRLGAKLVALVLRNNMFRSSVPAEVTKFYQLERFDISSNSFVGPFHPALLSLPSITYLNISRNQLTGMLFENLTCSSELQVVDLSSNLLTGSLPGCLESKSNNKTVLYARNCLQDMNQNQHLLPFCHTEALAVGILPESKKRKDQSKVGLSLGIVGGILGGVALLALVFFIIRRGNVRSNVKNPPTRLMSESETPKYPSKHLSDARYISQTMKLATVGLPSYRTFSLEEIVAATNNFDTSSFMGESSQGQMYRGRLRDGFLVAIRCVKMKKRYSIHNFMHLIELISQLRHRHLVCALGHCFEYYLEDSTVSRLFLVFEYVPNGTLKSWISADGRSRKSLGWTQRIEAAIGVAKGIQYLHTGIVPGVYSNNLKTTDVLLDQNLGAKICSYNLPFLSDIRKVGHGASSSGSKSPGVNKSAKHEDKSDIYDFGAILQEVILGRAAKSRNEADGLRVLFHASIVGDEEARRSIVDAGVRKSCLDQSLKTMMEICARCLAKDPAERPSIEDVLWNLQFAAQVQDAWRGESQSSEGSPVSPFEPRRLTFH 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3568 784 SMART LRR_typ_2 292 312 IPR003591 -
Prci1g3568 784 SMART LRR_typ_2 223 246 IPR003591 -
Prci1g3568 784 SMART LRR_typ_2 176 199 IPR003591 -
Prci1g3568 784 SMART LRR_typ_2 152 175 IPR003591 -
Prci1g3568 784 SMART LRR_typ_2 200 222 IPR003591 -
Prci1g3568 784 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Prci1g3568 784 Gene3D Phosphorylase Kinase; domain 1 448 559 - -
Prci1g3568 784 MobiDBLite consensus disorder prediction 762 784 - -
Prci1g3568 784 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 559 - -
Prci1g3568 784 Gene3D Ribonuclease Inhibitor 28 244 IPR032675 -
Prci1g3568 784 Gene3D Ribonuclease Inhibitor 245 386 IPR032675 -
Prci1g3568 784 SUPERFAMILY Protein kinase-like (PK-like) 456 753 IPR011009 -
Prci1g3568 784 PANTHER UNNAMED PRODUCT 91 681 - -
Prci1g3568 784 ProSiteProfiles Leucine-rich repeat profile. 202 224 IPR001611 GO:0005515
Prci1g3568 784 Pfam Protein tyrosine and serine/threonine kinase 482 748 IPR001245 GO:0004672|GO:0006468
Prci1g3568 784 ProSiteProfiles Protein kinase domain profile. 477 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3568 784 Gene3D Transferase(Phosphotransferase) domain 1 560 766 - -
Prci1g3568 784 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 245 - -
Prci1g3568 784 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 560 767 - -
Prci1g3568 784 SUPERFAMILY L domain-like 33 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3568 Prci-Chr1 52529171 52534792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3568 43 772 Miscellaneous Gene Families AT3G03770 61.905 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Prci1g3568 PK_Tyr_Ser-Thr 5.6e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3568 - - gmx:100807539 1097.42