Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3567 ATGCCGAATAAATCAGTCTCAAAAGGGCAACTTGCAGAAAGGGATTGTGGAGGAATGCCTCTGATGTGGGACGTGGAGCCCGTTTCCAAATCCTGCAAGTCCAATGAAGAAGAGGAAGGCGACAAAAAGCCTCTGTTCCTTCAATGCGCAGAACTCATCCTCCCATGGCTAACCCCTTTGGAGCTTGCCAATGTCTCTTTGACCTGCAAATCCTTTTCCCTAATTTCCAAGACCATCACCCTCCGCCGAGTATCTGATTCTTCAAGAGGATTTGAGAATTTGGCTATTCCATTTCGCAACACCGTCGACGATACGCCATATGCTTTCTTCATCTACACTCCTTCCCTAATTCTACCTTCTGATTCACAATTTCTTCGTCAACCTTGGGGCTTGAATTTTGCTGCCACCCGTGACAGGGTTGGTAAGCTCGCCATGGAATCGGTGAATTTAGTTGATGAAGAGGGTCAGAGTGTATCAGGTTGTGACTGTGACACTTGTGGGGATGTAGGAGATGAAGGTGACAGGTGTCCTTGTTCGAGCTTGGCCGGGTTGGATGTGGCTAACGAGTGCGGGCCGAGTTGTAAGTGCCGGTTGGAGTGTGGGAACCGGTTGAGTCAGAAGGGGATTCCGGTTCGGTTGAAAATCGTGAGGGATAGGAGGAAAGGATGGGGTTTGTTTGCGGAGCAATTGATACAGAAAGGGCAGTTCGTATGTGAATATGCAGGTGAACTCTTGACAACCAAGGAAGCGAGGAGGAGACATCGATGTTATGATGAACTTTCATCACAAGGTCAGTTTTCTTCTGCTCTTTTGGTTGTGAGGGAGCATCTGCCGTCTGGAAGGACTTGTTTGAGGATGAATATTGATGCCACAAGAATAGGAAATATTGCACGGTTCATTAATCATTCTTGTGATGGTGGTAATTTAAGCTCAAAACTAGTGAGAAGGTCGGGAGCTTTGTTTCCTCAACTGTGTTTCTTTGCCTTAGAAGATATAGAAAAAGATGGAGAGCTTACTTTTAGCTATGGAGAAATCAGGACAAGACCTGTGGGTTTGCCATGTTTTTGCGGTAGTTCTTCTTGCTTTGGAACACTGCCCTCAGAGAACACTTAA 1113 0.4636 MPNKSVSKGQLAERDCGGMPLMWDVEPVSKSCKSNEEEEGDKKPLFLQCAELILPWLTPLELANVSLTCKSFSLISKTITLRRVSDSSRGFENLAIPFRNTVDDTPYAFFIYTPSLILPSDSQFLRQPWGLNFAATRDRVGKLAMESVNLVDEEGQSVSGCDCDTCGDVGDEGDRCPCSSLAGLDVANECGPSCKCRLECGNRLSQKGIPVRLKIVRDRRKGWGLFAEQLIQKGQFVCEYAGELLTTKEARRRHRCYDELSSQGQFSSALLVVREHLPSGRTCLRMNIDATRIGNIARFINHSCDGGNLSSKLVRRSGALFPQLCFFALEDIEKDGELTFSYGEIRTRPVGLPCFCGSSSCFGTLPSENT 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3567 370 ProSiteProfiles SET domain profile. 211 343 IPR001214 GO:0005515
Prci1g3567 370 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 70 360 - -
Prci1g3567 370 SUPERFAMILY SET domain 94 363 IPR046341 -
Prci1g3567 370 ProSiteProfiles Post-SET domain profile. 350 366 IPR003616 -
Prci1g3567 370 Gene3D SET domain 68 348 IPR046341 -
Prci1g3567 370 Pfam SET domain 222 343 IPR001214 GO:0005515
Prci1g3567 370 SMART set_7 211 349 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3567 Prci-Chr1 52527056 52529758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3567 62 365 C2H2 Transcription Factor Family AT2G23740 28.349 8.36e-24 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci1g3567 SET 4.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3567 K11433 - qsa:O6P43_009907 469.544