Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3536 ATGCCTACCGCAGTTTCTCGGTCGACACGCTTGTTCTTGAACATTTCGCTGCTCCTAGTTTTGTGTGCTTTTCTGATTATTTGCCTCCACTCTTCGGAGCTCCCTGTTCGGCGGAACCGTTCCGCCTTAGGCGGCGGTGCTGACCATGATTGCAAGATGTTCCACACTCTAGAGGACTACAGAGCCAAGTGTTTGTTCCTAAAATCCAACGACCCATGCGTTTCGCAGGGCTATATTGACTATCTTTACCTTTTCTACTGCGATCTGGGTCGATTCCCTTTGTTGGGTCACTCGCTTCTCTTCCTTTGGCTCCTAGTCCTGTTTTACCTGCTCGCCAATACAGCTTCCGAATACTTCTGTTCCTCTCTTGAAAATCTGTCGAAATTACTGAAGCTATCCCCTACAATTGCTGGAGTGACCCTTCTTTCTCTCGGCAACGGTGCCAACGACGTTTTCGCCAGCCTCGTCTCCTTCAATGATAGTGAGACAAGCGACATTGGGTTCAATACGGTCATTGGGGGTGCTTTCTTCGTGTCCTGCGTCGTGGTTGGAATTGTAAGCATCTCAAGTCGCCGCAGGGGGATTCAAGTCAGAAAGAACTTTGTAAGAGATGTTTGTTTTCTTCTTTTCGTTCTTCTGTGCTTGCTTGTAATATTGATCATTGGCGGGATCAATTTTTTTGGAGCAGTGGGTTTTACTTTGATATATATCGTGTATGTTTCTGTCGTTTATGTCTCGTCCACTCGCTGGAATGGTGTGTCTGGAGATTCTGAACGGAATGGTAATTATCCATGCTATGACACAGACTTAAGTGTGCCTCTTGTCGTCGGCATGGAAGAAGGCGTATTTGATTAAGAGGAGAGTGATGGAGAGTTTGGCCCGAAAATCGATAAATGTTGCTTTATGAGATCATTGCCATGCCAAAAAGCACTTTGGGTTCTACATATGCCCCTTTACTTGCCAAGGAGATTGACGATTCCTGTTGTTTGTGAAAAAAGATGGTCTAAGCCATATGCAATTTCTTCAGTAATACTGTCACCTCTTCTCTTATCTGTAATATGGATCCCTTGCGAGGAAAACTGTTTCTTCAGTAAAGATCTAATCATTTATGGAATTGGATTGTTGATTGGGATGATATTAGGAGTAACTGCCTTTTTCACAACGAAGAGCGCAAGGCCACCAAAAAACTGCCTCTTCCCTTGGCTTGCAGGAGGGTTTATAATGAGTGTTGCCTGGAGTTATATTTTAGCTCAGGACTTGGTGGGATTGTTGGTTTCACTTGGCTACATATGTGGAATAAGTCCTTCAATATTGGGGCTCACAGTTCTTGCCTGGGGAGATTCTCTTGGGGATTTGATGACAAATTTGACAATGGTGTTGAAGGGTGGAGAAGGTGCTCAAGTAGCCATATCAGGTTGTTATGCTGGTCCCATCTTCAACACTCTTATTGGCTTGGGCTTGTCTCTAGTAATCTCTACTTGGTCGGAGTACCCATCATCTCTAGTGATCCCTTACAACCCATATCTCTTGGAGACATTGGCGTTTTTTGTCGGTGGACTGGTTTGGGCACTCGTGGTTTTAACAAGAAGAGATATGAGGCTTGATGGAGTCTTGGGAGGAGGGCTTTTAACTATTTACTTTATTTTTCTGTTTCTGAGGCTGATTCAGACGCTTGGGCCATTCCAGTTTCATGACAATATACTGAGATGA 1710 0.445 MPTAVSRSTRLFLNISLLLVLCAFLIICLHSSELPVRRNRSALGGGADHDCKMFHTLEDYRAKCLFLKSNDPCVSQGYIDYLYLFYCDLGRFPLLGHSLLFLWLLVLFYLLANTASEYFCSSLENLSKLLKLSPTIAGVTLLSLGNGANDVFASLVSFNDSETSDIGFNTVIGGAFFVSCVVVGIVSISSRRRGIQVRKMXFVRDVCFLLFVLLCLLVILIIGGINFFGAVGFTLIYIVYVSVVYVSSTRWNGVSGDSERNGNYPCYDTDLSVPLVVGMEEGVFDCXEESDGEFGPKIDKCCFMRSLPCQKALWVLHMPLYLPRRLTIPVVCEKRWSKPYAISSVILSPLLLSVIWIPCEENCFFSKDLIIYGIGLLIGMILGVTAFFTTKSARPPKNCLFPWLAGGFIMSVAWSYILAQDLVGLLVSLGYICGISPSILGLTVLAWGDSLGDLMTNLTMVLKGGEGAQVAISGCYAGPIFNTLIGLGLSLVISTWSEYPSSLVIPYNPYLLETLAFFVGGLVWALVVLTRRDMRLDGVLGGGLLTIYFIFLFLRLIQTLGPFQFHDNILR 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3536 571 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 309 561 - -
Prci1g3536 571 Gene3D - 341 556 IPR044880 -
Prci1g3536 571 Gene3D - 132 259 IPR044880 -
Prci1g3536 571 Pfam Sodium/calcium exchanger protein 404 555 IPR004837 GO:0016020|GO:0055085
Prci1g3536 571 Pfam Sodium/calcium exchanger protein 101 245 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3536 Prci-Chr1 52477270 52479403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3536 12 561 Antiporters AT5G17850 52.867 8.06e-160 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3536 K13754 - qsa:O6P43_006226 681.789