Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3530 ATGAAAATATCACTTTTGGTGTGCGTCTTGGTGCTGGTGCTCCCCGTGGCATTGGCTCAGCTCAAGGTTGGATTCTATAAGTCGTCCTGCCCAAAAGCCGAGTCCATCGTGAAGCAAGTGGTGCAGAAGCGATTCAACAGCGACAGGACCATCACCGCAGCCTTGCTTCGCATGCACTTTCACGACTGTTTCGTCCAGGGTTGCGATGCATCCATACTCATAGACTCCACTGACGCTGAGAAAGAGGCGGGTCAAAACTTGAGCGTCCGAGGATTCGATCTCATCGACCAGGTGAAGGAAAGGCTCGAAGCCGCGTGCCCTTCGACGGTGTCGTGTGCCGATATCATAACACTGGCCACCAGAGACGCCGTGGCTCTGGCCGGAGGACCCAAATATGAGGTCCCCACCGGAAGACGCGACGGGCTGGTGTCTAAAAGAAGCTCGGTTGATTTGCCAGGACCAGATATCTCTGTTCAGGATGCCCTAGATCTGTTTGACAAGAAGGGAATCAAAAGAGAAGAAGACATGGTGAGCCTTATGGGTGGGCACACTGTGGGAAAGGCATTTGGTAGACTTTTGGACGGCAAGACGCCGTCCACAGTGGATAACCAGTACTATAAGCAAATTCTTCAAAACAAGGGCGTTCTCTCTATTGATCAAAACCTTGCTGTTTCTGCGTCAACAAAGAGTATTGTCACCGCTCTTGCAGCAAACAATACCAGGTTTCAGATAAGCTTCGCAAATGCAATGATCAAGATGGGAAGAATTCAAGTTCTGGTTGGTAATGCTGGCGAGATTCGAAAGAAATGCGGTGCTTTTAACAATTAG 828 0.5 MKISLLVCVLVLVLPVALAQLKVGFYKSSCPKAESIVKQVVQKRFNSDRTITAALLRMHFHDCFVQGCDASILIDSTDAEKEAGQNLSVRGFDLIDQVKERLEAACPSTVSCADIITLATRDAVALAGGPKYEVPTGRRDGLVSKRSSVDLPGPDISVQDALDLFDKKGIKREEDMVSLMGGHTVGKAFGRLLDGKTPSTVDNQYYKQILQNKGVLSIDQNLAVSASTKSIVTALAANNTRFQISFANAMIKMGRIQVLVGNAGEIRKKCGAFNN 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3530 275 Pfam Peroxidase 37 237 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g3530 275 ProSitePatterns Peroxidases proximal heme-ligand signature. 175 185 IPR019793 -
Prci1g3530 275 PANTHER - 193 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g3530 275 FunFam Peroxidase 24 174 - -
Prci1g3530 275 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Prci1g3530 275 Gene3D - 254 274 - -
Prci1g3530 275 CDD secretory_peroxidase 20 273 IPR033905 GO:0004601|GO:0042744
Prci1g3530 275 PRINTS Plant peroxidase signature 90 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g3530 275 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g3530 275 PRINTS Plant peroxidase signature 109 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g3530 275 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g3530 275 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g3530 275 PRINTS Plant peroxidase signature 128 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g3530 275 Gene3D - 24 151 - -
Prci1g3530 275 Gene3D Peroxidase, domain 2 152 188 - -
Prci1g3530 275 Gene3D Peroxidase, domain 2 193 253 - -
Prci1g3530 275 ProSiteProfiles Plant heme peroxidase family profile. 20 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g3530 275 SUPERFAMILY Heme-dependent peroxidases 20 274 IPR010255 GO:0004601|GO:0006979|GO:0020037
Prci1g3530 275 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g3530 275 PRINTS Haem peroxidase superfamily signature 110 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g3530 275 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g3530 275 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g3530 275 PRINTS Haem peroxidase superfamily signature 128 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3530 Prci-Chr1 52359705 52360630 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3530 9 274 Peroxidase AT5G17820 52.475 4.53e-106 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3530 K00430 - egr:104443372 323.168