Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3528 ATGAGGTCCCCTTCAAATGGAAACCTCTCTGCATGCCTCCTGGGATGTGATGCCTCTATTCTTATAGACTCCACGGAGGGAAGTAAATCAGAAAAGGACGCAAAGGATAGCTTCTTCCTTTGGGGATTCAATTTCATCGATGATGTCAAGGAAATCCTGGAAGTTGAATGCCCTTCTATCGTCTCGTGTGCTGATATCATTGCACGTACTGTAAGAGACGTGGTGGCTCTAGTAGGAGGACCTAAGTATAAGGTCCCCACGGGGGGGCGCGATGGCTTGGTTTCAAATATTGATGAAGTGGATGGCATGTCCTTCGGTTTTGACAATTCATTCTACAAGCAGCTTCTTCTCGGGAAGGGTATATTGAAACTGGATCAATGCCTTGTTTTTGATAACTCCATGAGAGCTCTCGTTTACAAGTATGCGGTGAACAATGAGGTGTTTCTGCAGAGTTTTGCAAAAGCGATAGTGAAGATGGGAAGCATCAGTGTTCTGACCGGAGATGAAGGGGAGATTCGAAAGAATTGTAGGGCTTTTAATCATCCCAGGTAG 552 0.4547 MRSPSNGNLSACLLGCDASILIDSTEGSKSEKDAKDSFFLWGFNFIDDVKEILEVECPSIVSCADIIARTVRDVVALVGGPKYKVPTGGRDGLVSNIDEVDGMSFGFDNSFYKQLLLGKGILKLDQCLVFDNSMRALVYKYAVNNEVFLQSFAKAIVKMGSISVLTGDEGEIRKNCRAFNHPR 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3528 183 PRINTS Plant peroxidase signature 41 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g3528 183 PRINTS Plant peroxidase signature 79 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g3528 183 PRINTS Plant peroxidase signature 60 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g3528 183 Gene3D Peroxidase, domain 2 105 159 - -
Prci1g3528 183 Gene3D - 160 180 - -
Prci1g3528 183 PRINTS Haem peroxidase superfamily signature 61 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g3528 183 PRINTS Haem peroxidase superfamily signature 79 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g3528 183 PANTHER - 14 102 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g3528 183 Pfam Peroxidase 15 100 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g3528 183 SUPERFAMILY Heme-dependent peroxidases 14 180 IPR010255 GO:0004601|GO:0006979|GO:0020037
Prci1g3528 183 ProSiteProfiles Plant heme peroxidase family profile. 15 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g3528 183 Gene3D - 14 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3528 Prci-Chr1 52352057 52353471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3528 15 181 Peroxidase AT1G34510 34.979 9.43e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3528 K00430 - thj:104804948 157.532