Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3524 ATGGAAGATCAAGGTGAGGGGCAACAGGAGGCCAATACTCCGAACCAGGGCTTGGAGAGGAGCGAGCCGGTGAGGTCAAGGTGGACTCCAAAGCCTGAGCAAATCCTCATCCTTGAGTCCATCTTCAACAGTGGCATGGTCAATCCCCCCAAGGAAGAAACCATCCGCATCAGAAAGCTCCTCGAGAAGTTCGGTTCAGTCGGCGATGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGCCAGCGCCAGATGCAGGCCTCCCTCGAGCAGAGAAACCAGCTCCAGCCCCAGCTCGGCGGTGCAATTCCTTACGATCATCAACCTCACGCCACCTCCTCTTCTGATCCGCAACATCTTCCTCCTGTCGCTACTGTGCCTTTTGCTGCTCCTTCTCCGACTTTCCCTGATCTCTCCGGCTCCTCGTCTTCTACTAGCGGCATGCTTGGTGGCCAAGAAGCCCTCGATGGTCTCTTCTCGGTGGCTTCTCAAATCGGTTTTCCCGAATTTGACCACTCTTCGGCTCTATACCCTCCTCCGACTCATGCTTCCACCTTCAACTATCATTCCGGGCTCGTCACAGTGTTTATCAATGGAGTGGCAACAGAAGTTCCGAGGGGGCCATTGGACATAAAAACAATGTTTGGACAAGATTTAGTGTTAGTTCATTCCTCCGGAGTGCCACTTCCCACCAATGAGTTTGGTTTCCTGATGCAGAGCTTGCAGCATGGCGAAAGCTACTTTCTGGTTTCAAAGCCGACATAA 780 0.5385 MEDQGEGQQEANTPNQGLERSEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQMQASLEQRNQLQPQLGGAIPYDHQPHATSSSDPQHLPPVATVPFAAPSPTFPDLSGSSSSTSGMLGGQEALDGLFSVASQIGFPEFDHSSALYPPPTHASTFNYHSGLVTVFINGVATEVPRGPLDIKTMFGQDLVLVHSSGVPLPTNEFGFLMQSLQHGESYFLVSKPT 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3524 259 PANTHER WUSCHEL-RELATED HOMEOBOX 11 7 258 IPR044558 GO:0003700|GO:0048830
Prci1g3524 259 SMART HOX_1 23 90 IPR001356 GO:0003677
Prci1g3524 259 SUPERFAMILY Homeodomain-like 20 92 IPR009057 -
Prci1g3524 259 MobiDBLite consensus disorder prediction 7 22 - -
Prci1g3524 259 MobiDBLite consensus disorder prediction 1 29 - -
Prci1g3524 259 Gene3D - 23 93 - -
Prci1g3524 259 MobiDBLite consensus disorder prediction 104 151 - -
Prci1g3524 259 FunFam WUSCHEL-related homeobox 11 25 92 - -
Prci1g3524 259 ProSiteProfiles 'Homeobox' domain profile. 21 86 IPR001356 GO:0003677
Prci1g3524 259 Pfam Homeodomain 25 85 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3524 Prci-Chr1 52301268 52303264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3524 17 255 Wox Gene Family AT3G03660 53.755 7.04e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Prci1g3524 Homeodomain 2.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3524 - - lang:109335690 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3524 1 52301268 52303264 Prci1g3524 1 52301268 52303264 ECH