Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3461 ATGGGATCCCAAGGGGAAGCAACCCAAGAGCCAAAGGCACAATCTTCGGTTTACCAAGGATCATCCTTGTACAATCTGACTCTTGATGAAGTGCAAAACCAGCTTGGAAATTTTGGGAAGCCACTAGGCAGCATGAACCTCGATGAACTGCTCAAGAGTGTGGGCACTGCAGAAGGTACTGGTCAGCTAGCTTTTGGGTCGTCTCTGAATCGACAGAGCAGCCTGACATTATCTGAGGATGTTAGAAAGAAAACTGTTGATGAAGTTTGGAAAGATATGCAACAGAAGAAGAACACTAGGGAAGTGACGAAATCTCAAGAAAGACAAACTAAATTGGGTGAGATGACCCTTGAGGATTTCCTTGTGAAGGCAGGAGTGGTTTCGGATTCAAATATGGCTTCTGAACACAATATTTCAGAGCAAGCTCATTGGATTCAATACCAGCTCTCTTCACTGCACCAGCATCAAAATAATCACGATGTAATGGCAGGTTTAATGACTGGCCTTGGAGTTCAACAACAACCTTTGCCAGCAGTATCAAACCCAGTTTCGGATTCATCCTACTCTGAAAATATGGTGGCAACAATGTCACCATCTTCTTTGATGGGTAAGTTACCAGACACACATAGTCCGGGAAGGAAGAGGGAGGCCTCTGGAGATGTGGTTGAGAAAACCATGGAGAGGAGACAGAAGAGGATGATAAAAAATAGGGAATCTGCAGCTCGGTCACGAGCTAGAAAACAGGCTTACACAAATGAGCTGGAGATTAAAATTTCACATTTAGAAGAGGAGAATGAAAGGCTTAGAAGACAGCATGAAATAGAGAGAGTGCTGCCGCTTGTTCCACCAGCTGAGGGTAAGCATCAGCTTCGCAGAACAAGTTCGGCTTCTTTCTGA 897 0.4459 MGSQGEATQEPKAQSSVYQGSSLYNLTLDEVQNQLGNFGKPLGSMNLDELLKSVGTAEGTGQLAFGSSLNRQSSLTLSEDVRKKTVDEVWKDMQQKKNTREVTKSQERQTKLGEMTLEDFLVKAGVVSDSNMASEHNISEQAHWIQYQLSSLHQHQNNHDVMAGLMTGLGVQQQPLPAVSNPVSDSSYSENMVATMSPSSLMGKLPDTHSPGRKREASGDVVEKTMERRQKRMIKNRESAARSRARKQAYTNELEIKISHLEEENERLRRQHEIERVLPLVPPAEGKHQLRRTSSASF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3461 298 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 231 246 IPR004827 GO:0003700|GO:0006355
Prci1g3461 298 Coils Coil 251 278 - -
Prci1g3461 298 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 19 297 IPR043452 GO:0003700|GO:0045893
Prci1g3461 298 SMART brlzneu 224 292 IPR004827 GO:0003700|GO:0006355
Prci1g3461 298 Pfam bZIP transcription factor 228 271 IPR004827 GO:0003700|GO:0006355
Prci1g3461 298 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 226 278 - -
Prci1g3461 298 SUPERFAMILY Leucine zipper domain 228 274 IPR046347 GO:0003700|GO:0006355
Prci1g3461 298 MobiDBLite consensus disorder prediction 208 248 - -
Prci1g3461 298 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 226 271 IPR004827 GO:0003700|GO:0006355
Prci1g3461 298 Gene3D - 226 277 - -
Prci1g3461 298 CDD bZIP_plant_BZIP46 228 273 - -
Prci1g3461 298 MobiDBLite consensus disorder prediction 198 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3461 Prci-Chr1 51980266 51982939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3461 1 298 bZIP Transcription Factor Family AT3G56850 54.012 1.79e-98 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci1g3461 bZIP_1 3.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3461 K14432 - gmx:100783666 344.739