Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3443 ATGGGAAGGGTTCGGCTGCTTGTTTCAGATTTCCTCATGTCCTTCATGTGGGTGTGGTCTGGGGTTCTAATTAAGGTATCTGTCTCCAGATATTTGGGGTTGAGTCACCAGCCAGTTCTTGAGGCCGTGAAAATGACGCTTTCCATCATAAATATGTTCTTTTTTGCATTGTTGGGAATATGGACCCATGGCGGTGCCTATAATCCTCTCACAGTTTTAGCCGGTGCCATTTCTGGAGATTTCAGCAATTTCCTTTTCTGCGTTGGCGCTAGAATTCCCACTCAGGTGTTGGGATCTATTACTGGGGTTAGGTTCATAATTGATACAATTCCTGAAGTAGGGCGGGGACCACGTTTGAGCATTGACATCCATCGAGGTGCTCTGACAGAAGGATTCCTAACATTTGCAATTGTCATCATATCACTAGGGCTTGCTTCAAAACTTCCAGGAAGTTTCTATAGGAAGACTTGGATTTCCAGTATTTCCAAGCTAACACTTAATATACTTGGCTCTGATCTGACTGGTGGTATTATGAACCCAGCCTCTGTGATGGGATGGGCTTACAATCGAGGGGACCACATTACGAAAGAGCACATCCTTGTATACTGGCTTGCCCCCGTAAAGGCAACTCTACTAGCAGTGTGGATATTCAAATTGCTAGTTAGGCCTGCAACACGAGAAAACCAGCACAAAAACTAA 699 0.4478 MGRVRLLVSDFLMSFMWVWSGVLIKVSVSRYLGLSHQPVLEAVKMTLSIINMFFFALLGIWTHGGAYNPLTVLAGAISGDFSNFLFCVGARIPTQVLGSITGVRFIIDTIPEVGRGPRLSIDIHRGALTEGFLTFAIVIISLGLASKLPGSFYRKTWISSISKLTLNILGSDLTGGIMNPASVMGWAYNRGDHITKEHILVYWLAPVKATLLAVWIFKLLVRPATRENQHKN 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3443 232 Pfam Major intrinsic protein 5 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g3443 232 Gene3D Glycerol uptake facilitator protein. 3 232 IPR023271 -
Prci1g3443 232 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g3443 232 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g3443 232 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g3443 232 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g3443 232 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g3443 232 SUPERFAMILY Aquaporin-like 4 226 IPR023271 -
Prci1g3443 232 PANTHER AQUAPORIN SIP2-1-RELATED 1 231 IPR044226 GO:0015267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3443 Prci-Chr1 51834223 51836537 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3443 1 229 Major Intrinsic Protein MIP AT3G56950 60.435 1.17e-99 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3443 K09875 - jre:109005443 358.607