Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3440 ATGGAACAAGAGCCGCTTTTGCCGAGTGAAGATCTTCGCCGCAGTCGCGGGGCTAATCCCATGCTCCGCGCGTCCACCTTACGCGCCACTTTCACCCTCCCTCTGACTCGCTACACCACCCGTCTGATCGCGGCCGAGCACCACCGAATTTTCCTCGGCGACTGTACGGAGAACCTGTCGGGGGATGACGAGGACCGGCCCCTTGAGGACAGCAGTTGCGCCTATTCGAGACCCATTTTGGTTCTGGACCTTGTATGGAACCTGGCCTTTGTACTGGTCACTGCTGGTGTGCTTCTTTCCACGCTTAGCGAGCGTCCATCCACCCCTCTGAGGCTTTGGCTCTGTGGGTATGCTTTTGAGTGTATTCTGCATATGGGTTTTGTGTGTTTTGAGTATCGGCGGAGGACTCGAGATTTTTACCGAGCTGAGCCTGGGCTTTCGCTTTGCCAGAGTTGGAACAGCAATGTGAAGAAGTTAGAGTCTATGAACACATTGGTATCATCTATTTGGTGGGTCCTTGGGTTTTATTGGATTGTGGTGGGTGGCCAGCAGCTTTTGCAAGATTGTCCTCGTATCTACTGGTTAACAGTGGTCTTTCTAGCCTTTGATGTATTTTTTATTATATTTTGCATTGGGATGGTATGTGTAGTTTTCTTTGCTCTCTTCTTCTTCATCCCGATAGTAGCATTAGCTTATGCTATGAGAATCAGAGAAGGTGCATCAGAAGAGGATATCAGGTCTCTTCCTAAGTATAAGTTTAGTCAGCCAAATTCATTGTTGATGGTTGATGACAGTAAGAAGCAAGTTTCTAAAGCAAGAATAGATGCAAGCAATAGTAACCTTGTCAGCGAATTATATGTCAACCCAGATGATTCTGAATGCTGCATCTGCCTTTCTCCATACATAGAAGGGGCAGAACTTTATCGCCTTCCCTGCACACACCATTTTCATTGTGGTTGCATCAGCAGATGGCTTCGGACAAAAGCAACCTGCCCCCTCTGCAAATTTAATATTCTCAAGAGTGACACATTGGTTTGA 1038 0.475 MEQEPLLPSEDLRRSRGANPMLRASTLRATFTLPLTRYTTRLIAAEHHRIFLGDCTENLSGDDEDRPLEDSSCAYSRPILVLDLVWNLAFVLVTAGVLLSTLSERPSTPLRLWLCGYAFECILHMGFVCFEYRRRTRDFYRAEPGLSLCQSWNSNVKKLESMNTLVSSIWWVLGFYWIVVGGQQLLQDCPRIYWLTVVFLAFDVFFIIFCIGMVCVVFFALFFFIPIVALAYAMRIREGASEEDIRSLPKYKFSQPNSLLMVDDSKKQVSKARIDASNSNLVSELYVNPDDSECCICLSPYIEGAELYRLPCTHHFHCGCISRWLRTKATCPLCKFNILKSDTLV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3440 345 SMART ring_2 294 334 IPR001841 -
Prci1g3440 345 Pfam Ring finger domain 293 335 IPR001841 -
Prci1g3440 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 263 343 IPR013083 -
Prci1g3440 345 PANTHER TARGET OF ERK KINASE MPK-1 69 339 - -
Prci1g3440 345 SUPERFAMILY RING/U-box 287 340 - -
Prci1g3440 345 ProSiteProfiles Zinc finger RING-type profile. 294 335 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3440 Prci-Chr1 51797525 51801120 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3440 74 342 C3H Transcription Factor Family AT1G68070 46.853 8.60e-90 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3440 - - pcin:129306192 714.531