Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3436 ATGAGGACAATCAGAACAGGAAATGAATTGACGCCGAGACTTGCTGATATAAAAGCTTCAAAGCAAATGAGATGGCTGGTCTTGCTAGGCCCTGGTAAAAAGTCTGAAGAAGTCATGAAGAAAGCAGTTAGCTGGGACAACCAAGGCGTTGATGGTTTTCAACGACAAATTATTAAAGAACAAGATAAAGATCTTGAAATATTGGAAGAGAGAGTCGCAAGCACCAAACACATTGTATTGGCAGTTAACGAGGAACTTAGCCTGCATACTAGGCTTCTGGATAATTTGGATGAGCATGTGGATACAACCAATTCCCACATACGACAGTGA 330 0.4121 MRTIRTGNELTPRLADIKASKQMRWLVLLGPGKKSEEVMKKAVSWDNQGVDGFQRQIIKEQDKDLEILEERVASTKHIVLAVNEELSLHTRLLDNLDEHVDTTNSHIRQ 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3436 109 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 55 109 IPR000727 -
Prci1g3436 109 PANTHER SYNTAXIN 42 109 IPR045242 -
Prci1g3436 109 SUPERFAMILY SNARE fusion complex 46 108 - -
Prci1g3436 109 CDD SNARE_Qc 58 108 - -
Prci1g3436 109 Gene3D - 57 109 - -
Prci1g3436 109 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3436 Prci-Chr1 51740951 51747897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3436 28 109 SNARE and Associated Proteins AT1G16240 56.098 7.30e-27 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3436 K08503 - atri:130826783 114.39