Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3435 ATGAGGACAATCAGAACAGGAAATGAATTGACGCCGAGACTTGCTGATATAAAAGCTTCAAAGCAAATGAGATGGCTGGTCTTGCTAGGCCCTGGTAAAAAGTCTGAAGAAGTCATGAAGAAAGCAGTTAGCTGGGACAACCAAGGCGTTGATGGTTTTCAACGACAAATTATTAAAGAACAAGATAAAGATCTTGAAATATTGGAAGAGAGAGTCGCAAGCACCAAACACATTGTATTGGCAGTTAACGAGGAACTTAGCCTGCATACTAGGCTTCTGGATAATTTGGATGAGCATGTGGATACAACCAATTCCCACATACGACAGGTCTGGCCCTCGGTCCTTTACAGTTTATGTATGCTATTTTTCAGTGTAAGCATATTGTTGACTGTTTGA 396 0.4091 MRTIRTGNELTPRLADIKASKQMRWLVLLGPGKKSEEVMKKAVSWDNQGVDGFQRQIIKEQDKDLEILEERVASTKHIVLAVNEELSLHTRLLDNLDEHVDTTNSHIRQVWPSVLYSLCMLFFSVSILLTV 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3435 131 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 55 117 IPR000727 -
Prci1g3435 131 SUPERFAMILY SNARE fusion complex 46 111 - -
Prci1g3435 131 CDD SNARE_Qc 58 110 - -
Prci1g3435 131 Gene3D - 57 111 - -
Prci1g3435 131 Coils Coil 58 78 - -
Prci1g3435 131 PANTHER SYNTAXIN 42 109 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3435 Prci-Chr1 51740950 51747059 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3435 28 114 SNARE and Associated Proteins AT1G16240 55.172 9.33e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3435 K08503 - atri:130826783 115.546