Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3434 ATGAGGACAATCAGAACAGGAAATGAATTGACGCCGAGACTTGCTGATATAAAAGCTTCAAAGCAAATGAGATGGCTGGTCTTGCTAGGCCCTGGTAAAAAGTCTGAAGAAGTCATGAAGAAAGCAGTTAGCTGGGACAACCAAGGCGTTGATGGTTTTCAACGACAAATTATTAAAGAACAAGATAAAGATCTTGAAATATTGGAAGAGAGAGTCGCAAGCACCAAACACATTGTATTGGCAGTTAACGAGGAACTTAGCCTGCATACTAGGCTTCTGGATAATTTGGATGAGCATGTGGATACAACCAATTCCCACATACGACAGATGCTGGACATAAGATGCAGGGTCAATTGCATTTTCAACAGTTAA 372 0.4086 MRTIRTGNELTPRLADIKASKQMRWLVLLGPGKKSEEVMKKAVSWDNQGVDGFQRQIIKEQDKDLEILEERVASTKHIVLAVNEELSLHTRLLDNLDEHVDTTNSHIRQMLDIRCRVNCIFNS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3434 123 Gene3D - 57 113 - -
Prci1g3434 123 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 55 108 IPR000727 -
Prci1g3434 123 PANTHER SYNTAXIN 42 109 IPR045242 -
Prci1g3434 123 SUPERFAMILY SNARE fusion complex 46 109 - -
Prci1g3434 123 CDD SNARE_Qc 58 108 - -
Prci1g3434 123 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3434 Prci-Chr1 51740950 51747897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3434 28 110 SNARE and Associated Proteins AT1G16240 55.422 9.53e-27 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3434 K08503 - atri:130800829 114.775