Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3433 ATGAGGACAATCAGAACAGGAAATGAATTGACGCCGAGACTTGCTGATATAAAAGCTTCAAAGCAAATGAGATGGCTGGTCTTGCTAGGCCCTGGTAAAAAGTCTGAAGAAGTCATGAAGAAAGCAGTTAGCTGGGACAACCAAGGCGTTGATGGTTTTCAACGACAAATTATTAAAGAACAAGATAAAGATCTTGAAATATTGGAAGAGAGAGTCGCAAGCACCAAACACATTGTATTGGCAGTTAACGAGGAACTTAGCCTGCATACTAGGCTTCTGGATAATTTGGATGAGCATGTGGATACAACCAATTCCCACATACGACAGGTGGTGCAAATGAGGTTATCCATGTTGAGCAAGGGGCACTAA 369 0.4201 MRTIRTGNELTPRLADIKASKQMRWLVLLGPGKKSEEVMKKAVSWDNQGVDGFQRQIIKEQDKDLEILEERVASTKHIVLAVNEELSLHTRLLDNLDEHVDTTNSHIRQVVQMRLSMLSKGH 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3433 122 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 55 117 IPR000727 -
Prci1g3433 122 Gene3D - 57 116 - -
Prci1g3433 122 CDD SNARE_Qc 58 110 - -
Prci1g3433 122 PANTHER SYNTAXIN 42 109 IPR045242 -
Prci1g3433 122 Coils Coil 58 78 - -
Prci1g3433 122 SUPERFAMILY SNARE fusion complex 46 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3433 Prci-Chr1 51740949 51750039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3433 28 120 SNARE and Associated Proteins AT1G16240 53.763 1.43e-27 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3433 K08503 - pop:18106091 120.553