Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3418 ATGTCAGATAGACTATCCCTGGGCGATGCTGAGCAGAAAAACCTTAAGCGTAAGATGACTGAGGAGTCAATATCAGAACGACCTTCCATGGACGACGATGAGTCTGCAGAGGAGCTTCTGACTCTGAAGCTGATGGTGGGTTCATCGTCTGGACCAACTGGTGAGGCCTCTAACAACGACGAGACAACAACGAGAGTGGAGGGCAGTGATAATGATCTGCAGCGAAAATTCTCTTGCAAGTTCTGCAACAAGAAGTTCCATAACTCTCAAGCTCTGGGTGGACACCAAAATGCTCACAGACGCGAACGTGTACTCAACAAAATTGACAAAGAGTTTGAGGTGGGCACTTTTGGACGCTTTGGTCCTCACTTTTGCCCTTATTCAACCATGGCTGGTCTTCCTTTTACAGGGTCACCTTTTTATCCAGGGCTTCATCATCACATGAACCCACTGGCGGCTCGTTACGGCTTGCAAGGGCCAGCCAACTCGGCCCCGGAGGCGTTCCGGTTCGGCACGAGAAGCTCCTGGGCTGAAGAAGGAGCGGTTCAGCGCAGAGCGAATCGGAGAAACAATGTTCGGAGTACTTCACCTGCAAGTACAAGGCCAGGTGATCAATCAGCAGTAACTGGTGCGAGTGGCGAAGGCTTCCAGAGAAACTCATATACAGGAAGCATTCATGGTGAACCATCAAGCCTCGACTTGACTCTCAGTCTGTAA 717 0.5049 MSDRLSLGDAEQKNLKRKMTEESISERPSMDDDESAEELLTLKLMVGSSSGPTGEASNNDETTTRVEGSDNDLQRKFSCKFCNKKFHNSQALGGHQNAHRRERVLNKIDKEFEVGTFGRFGPHFCPYSTMAGLPFTGSPFYPGLHHHMNPLAARYGLQGPANSAPEAFRFGTRSSWAEEGAVQRRANRRNNVRSTSPASTRPGDQSAVTGASGEGFQRNSYTGSIHGEPSSLDLTLSL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3418 238 MobiDBLite consensus disorder prediction 46 64 - -
Prci1g3418 238 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Prci1g3418 238 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 31 198 IPR044246 GO:0009788
Prci1g3418 238 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
Prci1g3418 238 MobiDBLite consensus disorder prediction 179 238 - -
Prci1g3418 238 MobiDBLite consensus disorder prediction 1 70 - -
Prci1g3418 238 SUPERFAMILY beta-beta-alpha zinc fingers 75 104 IPR036236 -
Prci1g3418 238 MobiDBLite consensus disorder prediction 1 39 - -
Prci1g3418 238 Gene3D Classic Zinc Finger 56 114 - -
Prci1g3418 238 MobiDBLite consensus disorder prediction 187 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3418 Prci-Chr1 51618604 51619320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3418 58 170 C2H2 Transcription Factor Family AT1G24625 39.496 6.98e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3418 - - pcin:129302275 482.641