Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3417 ATGATAATAATTCAGTTAGCCAAAGCTTTGCAGTACCTTCATAACCTCGGGATATTACATAGAGATGTGAAACCAGCAAATATTCTTCTTGACGAAAATCATTATCCACACCTCGCAGATTTTGGTTTGGCCGAATACAAAAATGACCTTAAGGGAGTTTCTCTTGAGAATTGGAAGTCTTCTGGCAAGCCTACAGGTGGTTTTCATAAAAAAAATATGGTTGGAACTCTAATTTACATGGCTCCTGAAATATTAAGAAAGGAGTTGCACACAGAAAAATCAGATGTCTACAGTTTTGGGGTGACAATCAACGAGCTCCTTACAGGTGTTGTCCCATATACTGATCTTCGTGCAGAAGCTCAGGCTCACACGGTACTGGAGATGAACTATACAGAGCAGCAACTGACTGTAGCTGTTGTTTCTGATGGATTAAGGCCAGTCCTTGCTGCTCAGGAGTCAGGCGTACCTTCAAGATTATTAGCATTAATACAGAAATGCTGGGATGCACAACCTGAAAATAGACCTTCCTTTGATGATATAGTTAAGGAGCTTGATTCTATCATTGAGCACAGAAGGGACGTTGAGGATAGACAGTTCAGACCCTGTAAGTTGCATGATAGTCATGTTGTAGACGAGACCGCTACTCTCCTACAGGCTTATCAAGAGAATATCAACTGGTTCAGTCTGGGAGAACTTTTCTCAAAGAGATCCTCCAGCGAAACTTATCCTAATTTGAGAACCTGGCATGGGCCTTTTGATGAGCCTTTGGCTTACTGTCCAACACTTTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAGACCATGGAGGACACGCATTTCATTCTTCCCAGCATGTGCAATGAAAAGGATATACATGCTTTTGGTATCTTTGATGGTCATAGAGGTGCAGCGGCTGCTGAGTTTTCTGCTCGAGCCATGCCAGGATTCCTGCAAGCTTTAGGATCTCTGGGAGGTCCAGCTACCACACTAGTTGAGGCATTCCTTAGAACGGATGTTGCCTTCAGACAAGAGCTTGATTCCTCTCGCAAATCCAGAAGAGTTACCCAGAAGGATTGGCATCCTGGTTGTACGGCGCTTGCTGCTCTTGTAGTCAGGAACAAGCTTTTTGTTGCTAACTGTGGTGATTGCAGGGCAATCTTATGCCGGGCTGGTTCTCCTATTGCTCTAAGCAAGGATCATGTTGCAAGCTGTCCTGAAGAGAGAGAGCGTGTTATTAGAGATGGAGGGCAAGTCCACTGGCAAGTTGATACCTGGAGGGTTGGCCTTCCTGCACTTCAGGTTACTCGTTCAATGGGGGATGATGATCTGAAGCCGGCTGTAACTGCAGAACCTGAGATAAGTGAAACTACTTTATCTGCAGACGATGAATACCTGGTGATGGCGAGCGATGGACTTTGGGATGTGATGAGCAATAAAGAAGTGATAAACATGATCAAAGATACAGTGAAAGAGCCTGGAATGTGCTCGAAGAGGTTGGCTACGGAAGCAGTGGAACGGGGCAGCAAAGATAACATTACAGTCATCGTGGTTTTCTTGCGCCCCGTCTCTACAGCAGAGAGAATTTATTAG 1593 0.4488 MIIIQLAKALQYLHNLGILHRDVKPANILLDENHYPHLADFGLAEYKNDLKGVSLENWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGVTINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTVAVVSDGLRPVLAAQESGVPSRLLALIQKCWDAQPENRPSFDDIVKELDSIIEHRRDVEDRQFRPCKLHDSHVVDETATLLQAYQENINWFSLGELFSKRSSSETYPNLRTWHGPFDEPLAYCPTLSWGSYATCGRRETMEDTHFILPSMCNEKDIHAFGIFDGHRGAAAAEFSARAMPGFLQALGSLGGPATTLVEAFLRTDVAFRQELDSSRKSRRVTQKDWHPGCTALAALVVRNKLFVANCGDCRAILCRAGSPIALSKDHVASCPEERERVIRDGGQVHWQVDTWRVGLPALQVTRSMGDDDLKPAVTAEPEISETTLSADDEYLVMASDGLWDVMSNKEVINMIKDTVKEPGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3417 530 Gene3D - 258 525 IPR036457 -
Prci1g3417 530 SUPERFAMILY PP2C-like 258 522 IPR036457 -
Prci1g3417 530 SUPERFAMILY Protein kinase-like (PK-like) 2 210 IPR011009 -
Prci1g3417 530 Gene3D Transferase(Phosphotransferase) domain 1 1 215 - -
Prci1g3417 530 CDD PP2Cc 265 520 IPR001932 -
Prci1g3417 530 Pfam Protein phosphatase 2C 268 513 IPR001932 -
Prci1g3417 530 SMART PP2C_SIG_2 278 520 IPR001932 -
Prci1g3417 530 ProSiteProfiles Protein kinase domain profile. 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3417 530 ProSiteProfiles PPM-type phosphatase domain profile. 263 520 IPR001932 -
Prci1g3417 530 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 254 524 - -
Prci1g3417 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 18 30 IPR008271 GO:0004672|GO:0006468
Prci1g3417 530 Pfam Protein kinase domain 2 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3417 530 SMART PP2C_4 253 518 IPR001932 -
Prci1g3417 530 PANTHER PROTEIN PHOSPHATASE 234 518 IPR015655 GO:0004722|GO:0006470
Prci1g3417 530 SMART serkin_6 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3417 Prci-Chr1 51610424 51616259 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3417 1 530 PP2C-type Phosphatase Gene Family AT2G40860 67.730 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Prci1g3417 PP2C 2.1e-66 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3417 - - pcin:129322187 1064.29