Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3416 ATGGGCTTAGAGATTATGGTGCCCAACACGTGCATTAGGGGCTGCTGTACCAGCACTTCTATTCCTCTTCATGTTCCTCCTTCCTCTTTTACTCTTTTATCTCCAATTGCCAAAGGGGCGGAGAGTGTTGTTTACGAAGGGACTTTAGATGGCAACAAAGTTGCTGTGAAGAAACCTATCCTGTCAACTACAGAAGATATTAACAAGTTCCACAAGGAATTACAACTGTTATGCAAGTTAGATCACCCGGGAATAGCAACACTGATTGCTGCCCATGCAAAGCCGCCCAATTACCTCTTTTTCTTCAAATTCTATGAATCTCTCAACCTTGCACAAAAGTTACACTTGGAAGAATGGACTCCGAGCATCAATTACGCACTCATGATAATAATTCAGTTAGCCAAAGCTTTGCAGTACCTTCATAACCTCGGGATATTACATAGAGATGTGAAACCAGCAAATATTCTTCTTGACGAAAATCATTATCCACACCTCGCAGATTTTGGTTTGGCCGAATACAAAAATGACCTTAAGGGAGTTTCTCTTGAGAATTGGAAGTCTTCTGGCAAGCCTACAGGTGGTTTTCATAAAAAAAATATGGTTGGAACTCTAATTTACATGGCTCCTGAAATATTAAGAAAGGAGTTGCACACAGAAAAATCAGATGTCTACAGTTTTGGGGTGACAATCAACGAGCTCCTTACAGGTGTTGTCCCATATACTGATCTTCGTGCAGAAGCTCAGGCTCACACGGTACTGGAGATGAACTATACAGAGCAGCAACTGACTGTAGCTGTTGTTTCTGATGGATTAAGGCCAGTCCTTGCTGCTCAGGAGTCAGGCGTACCTTCAAGATTATTAGCATTAATACAGAAATGCTGGGATGCACAACCTGAAAATAGACCTTCCTTTGATGATATAGTTAAGGAGCTTGATTCTATCATTGAGCACAGAAGGGACGTTGAGGATAGACAGTTCAGACCCTGTAAGTTGCATGATAGTCATGTTGTAGACGAGACCGCTACTCTCCTACAGGCTTATCAAGAGAATATCAACTGGTTCAGTCTGGGAGAACTTTTCTCAAAGAGATCCTCCAGCGAAACTTATCCTAATTTGAGAACCTGGCATGGGCCTTTTGATGAGCCTTTGGCTTACTGTCCAACACTTTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAGACCATGGAGGACACGCATTTCATTCTTCCCAGCATGTGCAATGAAAAGGATATACATGCTTTTGGTATCTTTGATGGTCATAGAGGTGCAGCGGCTGCTGAGTTTTCTGCTCGAGCCATGCCAGGATTCCTGCAAGCTTTAGGATCTCTGGGAGGTCCAGCTACCACACTAGTTGAGGCATTCCTTAGAACGGATGTTGCCTTCAGACAAGAGCTTGATTCCTCTCGCAAATCCAGAAGAGTTACCCAGAAGGATTGGCATCCTGGTTGTACGGCGCTTGCTGCTCTTGTAGTCAGGAACAAGCTTTTTGTTGCTAACTGTGGTGATTGCAGGGCAATCTTATGCCGGGCTGGTTCTCCTATTGCTCTAAGCAAGGATCATGTTGCAAGCTGTCCTGAAGAGAGAGAGCGTGTTATTAGAGATGGAGGGCAAGTCCACTGGCAAGTTGATACCTGGAGGGTTGGCCTTCCTGCACTTCAGGTTACTCGTTCAATGGGGGATGATGATCTGAAGCCGGCTGTAACTGCAGAACCTGAGATAAGTGAAACTACTTTATCTGCAGACGATGAATACCTGGTGATGGCGAGCGATGGACTTTGGGATGTGATGAGCAATAAAGAAGTGATAAACATGATCAAAGATACAGTGAAAGAGCCTGGAATGTGCTCGAAGAGGTTGGCTACGGAAGCAGTGGAACGGGGCAGCAAAGATAACATTACAGTCATCGTGGTTTTCTTGCGCCCCGTCTCTACAGCAGAGAGAATTTATTAG 1974 0.4458 MGLEIMVPNTCIRGCCTSTSIPLHVPPSSFTLLSPIAKGAESVVYEGTLDGNKVAVKKPILSTTEDINKFHKELQLLCKLDHPGIATLIAAHAKPPNYLFFFKFYESLNLAQKLHLEEWTPSINYALMIIIQLAKALQYLHNLGILHRDVKPANILLDENHYPHLADFGLAEYKNDLKGVSLENWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGVTINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTVAVVSDGLRPVLAAQESGVPSRLLALIQKCWDAQPENRPSFDDIVKELDSIIEHRRDVEDRQFRPCKLHDSHVVDETATLLQAYQENINWFSLGELFSKRSSSETYPNLRTWHGPFDEPLAYCPTLSWGSYATCGRRETMEDTHFILPSMCNEKDIHAFGIFDGHRGAAAAEFSARAMPGFLQALGSLGGPATTLVEAFLRTDVAFRQELDSSRKSRRVTQKDWHPGCTALAALVVRNKLFVANCGDCRAILCRAGSPIALSKDHVASCPEERERVIRDGGQVHWQVDTWRVGLPALQVTRSMGDDDLKPAVTAEPEISETTLSADDEYLVMASDGLWDVMSNKEVINMIKDTVKEPGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3416 657 CDD PP2Cc 392 647 IPR001932 -
Prci1g3416 657 ProSiteProfiles Protein kinase domain profile. 30 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3416 657 Pfam Protein kinase domain 33 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3416 657 FunFam Protein kinase and PP2C-like domain-containing protein 20 345 - -
Prci1g3416 657 Gene3D - 385 652 IPR036457 -
Prci1g3416 657 ProSiteProfiles PPM-type phosphatase domain profile. 390 647 IPR001932 -
Prci1g3416 657 SMART PP2C_SIG_2 405 647 IPR001932 -
Prci1g3416 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Prci1g3416 657 SUPERFAMILY PP2C-like 385 649 IPR036457 -
Prci1g3416 657 SMART PP2C_4 380 645 IPR001932 -
Prci1g3416 657 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 25 318 - -
Prci1g3416 657 SUPERFAMILY Protein kinase-like (PK-like) 22 337 IPR011009 -
Prci1g3416 657 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 381 651 - -
Prci1g3416 657 Pfam Protein phosphatase 2C 395 640 IPR001932 -
Prci1g3416 657 SMART serkin_6 30 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3416 657 Gene3D Transferase(Phosphotransferase) domain 1 19 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3416 Prci-Chr1 51610423 51616259 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3416 99 657 PP2C-type Phosphatase Gene Family AT2G40860 67.616 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Prci1g3416 Pkinase 1.1e-45 CL0016