Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3412 ATGGAAGGGAATGGGTGTTGCTGTGGGAGTTTTCTCCAGAGGTGTAAGCCTTACATAGCTATGATCTCACTTCAATTTGGTTACGCTGGGATGAACATAATCACTAAGGTCTCCCTCAACCGAGGGATGAGCCATTACGTGCTTGTCGTTTATCGTCACGCCTTCGCCACAGCTGCTATTGCTCCTTTCGCTCTTGTTCTTGAGAGAAAAGTGAGGCCCAGGATAACGTTTCTCATGTTCGTGCAAATTTTTGTGCTGGGTCTTCTCGGGCCCGTGATTGACCAAAACTTGTACTACGCGGGATTGAAATTCACCTCCCCGACATACTCGTGTGCTATAAGCAACATGCTCCCTGCAATGACATTTGTGATGGCTGTTCTTTGCAGGATGGAGAAGGTAGACCTGCGAAAAGTTCGATGCATAGCAAAAATAATAGGAACCATAGTAACGATTGCCGGGGCCATGTTGATGACGTTGTACAAAGGTCAAGTCATCAACTTTTTCTGGACTCAATACATACATCGTCCTAGAAATTATGTTAACCCCTCTGATTCAGCGGAAAAAGATTGGGTTAAGGGTTCTATTCTGCTCATTATTGCTACCCTTGCCTGGGCTTCTTTCTTCATCCTTCAGGCAGTGACGTTAAGGAAATACTCTGCTCAGCTCTCGCTCACAGCTTTAGTGTGTTGTATGGGTACACTTCAGTCAATTGCAGTCACCTTTGTGATGGAACACAAGCCATCCGCTTGGAGCATTGGCTGGGACATGAATCTGTTTGCTGCAGCCTATGCAGGTATAGTATCATCAGGCATTGCCTACTATGTTCAAGGGATTGTCATGCAGAGAAAAGGGCCTGTTTTTGTCACTTCCTTCAGTCCTTTGATGATGATCATCGTTGCCGTCATGGGATCATTCATCCTTGCTGAAAAAATTTACCTTGGAGGAGTGATTGGATCGATACTGATCGTAGCGGGTCTGTACTCGGTTCTATGGGGGAAACACAAGGAGAACCAAGAGAAAGAAGCAGAGATATTAGTTCCAGAAATGATCAAAGGATGCAAACAAAATGGAAGGATGCAGACTGTTCTAGAAGACATTGAAGAAAACGACATTGAGATGCAAGAGCATGAAGCTAGGAAAGAATCTGTTCCTGCGGTAGCCATTAGTGTTCCACAGGCTTGA 1182 0.4509 MEGNGCCCGSFLQRCKPYIAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPRITFLMFVQIFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNMLPAMTFVMAVLCRMEKVDLRKVRCIAKIIGTIVTIAGAMLMTLYKGQVINFFWTQYIHRPRNYVNPSDSAEKDWVKGSILLIIATLAWASFFILQAVTLRKYSAQLSLTALVCCMGTLQSIAVTFVMEHKPSAWSIGWDMNLFAAAYAGIVSSGIAYYVQGIVMQRKGPVFVTSFSPLMMIIVAVMGSFILAEKIYLGGVIGSILIVAGLYSVLWGKHKENQEKEAEILVPEMIKGCKQNGRMQTVLEDIEENDIEMQEHEARKESVPAVAISVPQA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3412 393 PANTHER WAT1-RELATED PROTEIN 16 340 IPR030184 GO:0016020|GO:0022857
Prci1g3412 393 Coils Coil 359 379 - -
Prci1g3412 393 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
Prci1g3412 393 Pfam EamA-like transporter family 18 157 IPR000620 GO:0016020
Prci1g3412 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 160 - -
Prci1g3412 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3412 Prci-Chr1 51550665 51552876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3412 8 391 Nodulin-like Gene Family AT5G07050 64.103 1.26e-180 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3412 - - gmx:100793545 625.935