Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3410 ATGAAATCAATGGATCTCTTATCTCCATCATCTCTACTGTTCGTCTTCCTTATCTCTTTCTGTCTTTACCTTTTATTTTTCAAGTTTGCCAGAAAATCCTCCGAGAGGGGCTTCCGAAACTACCCCTTGCTGGGAACTTTACCTGATTTCTTGAAGCATCGCGAACGCTTCCTGGATTGGACCACCGAGGTTCTCCGGGACTGCCCCACCAACACCGCCGTCTTCTACCGTCCTGGCAAAGTCCGAGGCATCATCACGGCAAACCCAGACAACGTAGAGCATATGCTCAAAACCAACTTCCCCAATTATCCCAAAGGCGACCGATTCATTAGCCTCCTCCACGATTTCCTCGGCACAGGAATCTTCAACTCCGACGGCGACCTCTGGAAGGTTCAGAGGAAAACCGCCAGTTACGAGTTCAACACCAAATCGCTCCGAAACTTTGTTATTGAGAATGTCACCGTCGAAATTCAGACCAGGTTATTTCCTGTCCTCTCTCGGGCCTCCCAGACCCTCCGGGTTCTGGACATGCAGGACATCTTGGAGCGTTTCGCTTTCGACAACATTTGCAAGCTCGCTTTCAACTACGACCCTAAATGTCTCGGAGGCGAGGGAACCGGCGGAACGGAATTCATGTCGGCGTTCGAGGATGCCGCGACGCTGAGCTCCGGGAGGTTCAGATACGCTTTGCCTGGCGTGTTTAAAATCAAGAGGTGGTTCAACGTAGGATCGGAGCGGAGGCTGAGAGCAATCGTGACGGTACACAAGTTCGCGGATGAGATCATAAGGTCCAGATTGGAAGCTAAGGACACAAATCAAGACCTGGACTTATTGTCTCGGTTTATCGGAACGGAAGAGAGTTCTCCGGAATTTCTGCGAGATATCGTGATAAGCTTCATTCTAGCAGGGCGAGACACAACGTCGGCTGCTCTGAGCTGGTTCTTCTGGATACTATCCTCAAGACCAGACGTGATGCAGGAAATAAGAGACGAGCTAAGAGCTATTCGCTCGCGAAATGGGAAGAACAAAGGGGATGCCTTTGTGTTCGATGAGCTGAAAGAAATGAACTACCTTCAAGCAGCTATTTCGGAAACGATGAGGTTGTACCCACCAGTACCGGTAGACACGAAAGCATGCCTGAACGACGACGTGTTACCTGATGGGACGGTGATTCAGAAGGATTGGTTCATATCTTACCACACCTACGCCATGGGAAGAATGGAGAGCATCTGGGGAAAGGATTGCTGCGAATTCAAACCAGAAAGATGGCTTGAAAACGGGGTTTACAGAGGTGAGAATCCGTTCCGATATCCAGTGTTCCATGCAGGTCCAAGGCTGTGTTTGGGCAAAGACTTGGCCTACATTCAGATGAAGTGCATAGCGGCTTCAGTGTTGGAGTTGTTTGAGATAGAGGCACAGAATAAGGACAAGTGTCCCGACGATGTGTTATCTTTGACTTTGAGGATGAAAGAAGGCTTGCCCGTTGGGGTATCCGAGAGAAATGTCTCGTGTTGTGAATCCTGA 1524 0.4954 MKSMDLLSPSSLLFVFLISFCLYLLFFKFARKSSERGFRNYPLLGTLPDFLKHRERFLDWTTEVLRDCPTNTAVFYRPGKVRGIITANPDNVEHMLKTNFPNYPKGDRFISLLHDFLGTGIFNSDGDLWKVQRKTASYEFNTKSLRNFVIENVTVEIQTRLFPVLSRASQTLRVLDMQDILERFAFDNICKLAFNYDPKCLGGEGTGGTEFMSAFEDAATLSSGRFRYALPGVFKIKRWFNVGSERRLREXIVTVHKFADEIIRSRLEAKDTNQDLDLLSRFIGTEESSPEFLRDIVISFILAGRDTTSAALSWFFWILSSRPDVMQEIRDELRAIRSRNGKNKGDAFVFDELKEMNYLQAAISETMRLYPPVPVDTKACLNDDVLPDGTVIQKDWFISYHTYAMGRMESIWGKDCCEFKPERWLENGVYRGENPFRYPVFHAGPRLCLGKDLAYIQMKCIAASVLELFEIEAQNKDKCPDDVLSLTLRMKEGLPVGVSERNVSCCES 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3410 508 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3410 508 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3410 508 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3410 508 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3410 508 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3410 508 CDD CYP86A 72 494 - -
Prci1g3410 508 Pfam Cytochrome P450 38 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3410 508 PANTHER CYTOCHROME P450 25 496 - -
Prci1g3410 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Prci1g3410 508 Gene3D Cytochrome P450 30 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3410 508 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3410 508 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3410 508 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3410 508 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3410 508 SUPERFAMILY Cytochrome P450 38 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3410 Prci-Chr1 51513612 51515415 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3410 33 502 Cytochrome P450 AT3G56630 62.658 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3410 - - qsa:O6P43_006322 759.214