Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3406 ATGGCATCGAGCTCGATGTCGTCCTCCGGGTCATGGAGTGCCAAGGAGAACAAAGCCTTTGAGAGGGCTCTTGCAGTTTATGACAAGGACACTCCTGATCGTTGGTACAATGTTGCCAGGGCTGTTGGTGGGAAGACACCGGAGGAGGTGAAGAGGCACTATGAAATGCTTGTGAGGGACATTCAGCATATAGAATCTGGGAGAGTGCCCTTCCCCAACTACAAGAAAATTGGAAGCTTTGATGACCAAAAAAGGCTGAAAAACCTGCAGCTCCAGTGA 279 0.4982 MASSSMSSSGSWSAKENKAFERALAVYDKDTPDRWYNVARAVGGKTPEEVKRHYEMLVRDIQHIESGRVPFPNYKKIGSFDDQKRLKNLQLQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3406 92 Gene3D - 2 71 - -
Prci1g3406 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 83 IPR044636 GO:0003700
Prci1g3406 92 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Prci1g3406 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Prci1g3406 92 Coils Coil 88 92 - -
Prci1g3406 92 FunFam Transcription factor SRM1 4 71 - -
Prci1g3406 92 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Prci1g3406 92 CDD SANT 16 58 IPR001005 -
Prci1g3406 92 SMART sant 8 60 IPR001005 -
Prci1g3406 92 SUPERFAMILY Homeodomain-like 4 60 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3406 Prci-Chr1 51454994 51455746 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci1g3406 Myb_DNA-binding 1.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3406 - - gmx:100818368 149.828