Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3403 ATGTTATCACGACCATTATCTACGGTTGCAACAATACTATTTGTTGTTGCACAAATATTTGTGACTGTGATTTCAATCTCAGAGGGTGATAAGATCAGCAGCTTGCCGGGGCAGCCCACGGTGAAGTTCCAGCAATATGCCGGTTACATTACCGTCAACGACAAGCAGCAGAGAGCTTTGTTTTACTACTTTGCAGAAGCAGAAGTAGACCCTGCTTCCAAGCCTCTGGTTCTCTGGTTGAATGGAGGGCCTGGGTGTTCGTCTCTCGGAGCTGGAGCTTTTGTTGAGCATGGACCTTTCAAACCGACCGAAAATGGTCTGGTTAAGAATAATTGTAGCTGGAACAAAGAGGCAAATATGCTATACCTGGAATCACCAGCTGGAGTTGGTTTCTCTTACTCTGCCAACAAATCTTTCTACGGCTTTGTCAACGATGAAATAACAGCAAGGGATAATCTTGCTTTCCTTCAGCGTTGGTTTGATAAGTTTCCACAGTACAAGAATGCTGATTTCTTTATCACTGGCGAAAGCTATGCAGGCCATTATGTTCCTCAGCTTGCACAACTCATTGTTCAAACCAAGACTCCGTTCAATCTCAAGGGAATCGCAATAGGGAATCCTCTGTTAGAGTTTAACACAGATTTCAACTCAAGGGCAGAATATTTTTGGTCTCATGGACTAATATCAGATTCAACTTTCGAGAGGTTGAACACAGTATGTAACTATTCCCAAATCAGGAGGCAAGTTCAAAGCGGAGCTCTCACTCCAGTCTGTGCGGGAGTTAATAAACTAATGTCGAGGGAAATTGGTAAATATGTTGATACTTATGACGTCACTCTTGATGTCTGCTTGTCAACAATAAATCAACAATCTTTTGTGTTAAACCAATTGCAAGAGACCCAAAAGGTTGACGTTTGTGCAGGCGATGAAACAAATGATTACCTAAACAGGAAAGATGTACAAGAAGCTCTCCATGCTAAGCTTGTAGGACTCACCACATGGTCTGTTTGTAGCGAAGTTGTCAAATATGACTTGCAGAATCTAGAGACACCAACAATTCCTATCCTCGGGAAACTTGTTGAGTCAGGCATTCGAGTTATGGTATATAGCGGAGATCAAGATTCGGTGCTTCCACTAACCGGGTCGCGAGCTCTAGTAAATGCGCTAGCCAAGGAAATTAGATTCAATACGACCGTGCCCTACAGAGCGTGGTTTGAAGGCAGACAGGTTGCGGGATGGACACAAGTGTATGGTGGCATTTTATCATTCGCCACAATAAGAGGGGCAGCTCATGAAGCTCCATTTTCACAGCCAGAGAGATCACTCGTGCTATTTAAATCATTTTTGGAAGGCAAACCACTTCCTGAATTCCCTTCTTCATGA 1383 0.4338 MLSRPLSTVATILFVVAQIFVTVISISEGDKISSLPGQPTVKFQQYAGYITVNDKQQRALFYYFAEAEVDPASKPLVLWLNGGPGCSSLGAGAFVEHGPFKPTENGLVKNNCSWNKEANMLYLESPAGVGFSYSANKSFYGFVNDEITARDNLAFLQRWFDKFPQYKNADFFITGESYAGHYVPQLAQLIVQTKTPFNLKGIAIGNPLLEFNTDFNSRAEYFWSHGLISDSTFERLNTVCNYSQIRRQVQSGALTPVCAGVNKLMSREIGKYVDTYDVTLDVCLSTINQQSFVLNQLQETQKVDVCAGDETNDYLNRKDVQEALHAKLVGLTTWSVCSEVVKYDLQNLETPTIPILGKLVESGIRVMVYSGDQDSVLPLTGSRALVNALAKEIRFNTTVPYRAWFEGRQVAGWTQVYGGILSFATIRGAAHEAPFSQPERSLVLFKSFLEGKPLPEFPSS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3403 460 SUPERFAMILY alpha/beta-Hydrolases 33 455 IPR029058 -
Prci1g3403 460 Gene3D - 352 451 - -
Prci1g3403 460 Pfam Serine carboxypeptidase 36 451 IPR001563 GO:0004185|GO:0006508
Prci1g3403 460 Gene3D alpha/beta hydrolase 27 285 IPR029058 -
Prci1g3403 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 421 434 IPR001563 GO:0004185|GO:0006508
Prci1g3403 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Prci1g3403 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Prci1g3403 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Prci1g3403 460 FunFam Carboxypeptidase 25 455 - -
Prci1g3403 460 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Prci1g3403 460 FunFam Carboxypeptidase 352 451 - -
Prci1g3403 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 438 IPR001563 GO:0004185|GO:0006508
Prci1g3403 460 Gene3D - 306 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3403 Prci-Chr1 51432491 51436257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3403 314 454 Calmodulin-binding Proteins AT2G22960 29.078 7.43e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3403 K16297 - gmx:100805028 749.969