Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3400 ATGGGACTCTGTCATGGAAAACCTATTGAAATCTCACAAACTCATGGAGAAAACCCATTATATCCCGATGACAAGGACGGGCTTCCAAAAATTCAAACCCCCAAATCCTCAAACTTCCCCTTTTACAGCCCAAGTCCCTTGCCAAGTCTGTTCAAGAACTCACCAGCAAATTCAAGTGTGAGCTCAACTCCCTTGCGCATTTTCAAACGCCCATTTCCTCCTCCTTCGCCGGCGAAGCACATTCGGGCATTGCTCGCTCGCCGGCATGGTTCTGTGAAGCCAAACGAGGCCTCCATCCCCGAAGGAGGCGAATGCGAGATTGGGTTGGATAAGAACTTCGGGTTTTCGAAGCAGTTCGCAGCTCATTATGAACTTGGAGAAGAGGTGGGTCGTGGGCACTTTGGGTATACTTGCTCCGCCAAGGGAAAGAAAGGCAGCTTGAAGGGGCAAGATGTGGCCGTCAAAGTCATTCCAAAATCCAAGATGACAACAGCCATTGCTATAGAGGATGTACGGAGAGAAGTCAGGATATTGCGGGTTCTTGCAGGACACGAGAACCTAGTGCAGTTCTATGAAGCCTATGAAGACGATGAAAATGTTTATATAGTTATGGAGTTGTGCAAAGGAGGTGAGCTGCTAGATAGGATTCTTTCCAGGTGA 660 0.4833 MGLCHGKPIEISQTHGENPLYPDDKDGLPKIQTPKSSNFPFYSPSPLPSLFKNSPANSSVSSTPLRIFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGGECEIGLDKNFGFSKQFAAHYELGEEVGRGHFGYTCSAKGKKGSLKGQDVAVKVIPKSKMTTAIAIEDVRREVRILRVLAGHENLVQFYEAYEDDENVYIVMELCKGGELLDRILSR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3400 219 Pfam Protein kinase domain 123 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3400 219 SUPERFAMILY Protein kinase-like (PK-like) 118 218 IPR011009 -
Prci1g3400 219 MobiDBLite consensus disorder prediction 1 41 - -
Prci1g3400 219 Gene3D Transferase(Phosphotransferase) domain 1 115 219 - -
Prci1g3400 219 PANTHER SERINE/THREONINE-PROTEIN KINASE 109 217 - -
Prci1g3400 219 ProSiteProfiles Protein kinase domain profile. 123 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3400 219 FunFam CDPK-related kinase 1 116 211 - -
Prci1g3400 219 ProSitePatterns Protein kinases ATP-binding region signature. 129 155 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3400 Prci-Chr1 51378197 51380049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3400 35 219 EF-hand Containing Proteins AT3G50530 74.093 1.62e-94 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci1g3400 Pkinase 5.8e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3400 K13412 - cave:132162604 378.252