Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3381 ATGGAAATTCTAGGCAACACAACAGATGCCATTCTGCGAAGATTGGCCTCCCTTGCTTTAGATGAGATTCGACTCTCCTTGTCCTTCAAAGATGACCTAGACAAGCTTCGCAGTTATTTATCTTCCATTTCAGCCGTCCTCCTTGATGCAGAACAACGGCAAGAGAAGAGCCATGTAGTTAAAGATTGGTTGCGGAAGCTCAAAGACGCTCTGAACGATGCAAAAGACTTGCTAGATGATTTGGCCGCACAAGCTTTGAATCAGAAAGTCGAGGCTCCATTTATCATAGTCACTCAGGTACAGAACTTCTTCTTCTGTGGTGAGATGGCTCGTCGAATTAGGAAAATTACGGAGAGGTTACATCAGATAGACGAGGAAAGAAGCTTGTTTGACTCTACTCACTTTACGATGCCACTGAATAATGATCAGATCCTTGCCAATAGGAAGAAAATATCCCACTCTGTGCCTGTCACAGGGATAATTGGGCGAGAAAACGATAAAAAGGAAATCATTGATAAGTTGTCCAGGGATAATGATGAGAGTCTTTCTGTCATTCCTATTCATGGAATTGGTGGTTTGGGAAAGACCAGACTTGCTGAATGTGTATTTGACGATGATTGGGTTGAAGGGTATTTTGATTCCAGGCTCTGGATACAGGTGTCTGATGATTTGAAGGTTGAATGTGTTGCAAAGAAAATTATCGAAGCTATAAGCAATGCTGATTTTGATCATCTGAATATGCATGACTTGCGTAATTACCTTTCACAAACATTGGATGCGAAAAAGTTTTTACTTGTACTTGACGATGTTTGGATTGCAAATGCTTTGGAATGGGATACATTGAGACGCCTGTTAAAAACCGATGTCAAAGGAAGCAAAATTATTGTGACAACTCGATATAAAATTACTGCATCAATCATGGGTGGAGAGAATTTGCTTTCTTTAGCTAGTTTGCCTTTTGATGCGAGCTGGTATCTGTTTGACAGATGGGCATTTCTGGGGGGAGGAAGCATGAAGCACCCTAATCTCATAAAAATTGGTGCTGAGATAGTGGAGAGGTGCGGAGGAGTGCCTCTAGCACTACGTACTCTTGGAAGCTTACTGTGTTTGAATACAAATGAAACGTATTGGTTATCTGTGAAAAATGATGAGAGTTGGGAGAGAGCTAAAAGAGAAGATGATATTTTGCCAGTGCTCAAGATAAGCTATGATCAATTGCCTTCCCATCTAAAAGAATGCTTTGCATATTGCTCGTTACTTCCCAAGGGCAAGGATTTCGATAAGGAAACAGTAATTCAATTGTGGATGGCGCAAGGCTTAATTCATTCAGCTAGCGGATGTGAGCAATTAGAAGACGTTGGAAGTTGGTATTTTGATGAATTAGTGTCCAGATCCCTTTTTGATGTTGTTCAAAAGAATCACAAAGCTGAGATAGTGAAATGCAGAATGCATGATCTAATGCACGATCTTGCTAAATCAGTAGCTGGGTCAGAGTGCTTGCAAGTTGATTTTCATAGTGCAGGTATGTTTGAAAGCCCAAGACATGTGTCATTTTGGGATAGTCAATGCCTCAAAGAAGATATAATTCTATCGCTAAAAGCATCAAAGTTGAGGTCACTTCTTTTGCCTGTCAAATTGGGACCCCTATCATCAACCATTCTGGGTGTCTTTCTCTCTGATTCAACTTACTTGCGCATTTTGGATTTAAGTAATTCAGGCATAAGATATCTACCCAACTGCCTTGGTTGTCTGAAACATCTGAGGTATTTAAATCTGAATGGTAACCATGATCTTGAATACCTTCCTGATTCCATTTGCGGGCTTCATTTTCTGCAGACGTTGAAGTTGTTAGGTTGTATGAAAATCAATAAATTCCCTAGAAAATTCAGTAACTTGGTTTCGCTAAGAAATTTGGTCATTAACTCTCCTAGAATGCCTATTTGGGAGAAACAACTGGGGAGTTTGACCTCTCTTCGGTCATTGTCCATTGTGTATTGTGATAATCTTGTATCTTTGTCTGAGGGGATCCAGCACCTAAGAGCCCTACGAACATTGCGTATTCAAAACTGTGGCAAATTAACTTGCTTGGCAAACGGAAAGGAAAACTGCATTTCTCTAGAGAATCTGGAAATTATCAACTGTAAAAAGATAAGTTCGTTGGAGGATTGCCTAAAAGGTCTTCATAATCTTCGCTCATTAACCATCAAAGGTCTTCCACGGTTGCCCCAACTTGACGAGTTTGCCAGATAA 2250 0.4036 MEILGNTTDAILRRLASLALDEIRLSLSFKDDLDKLRSYLSSISAVLLDAEQRQEKSHVVKDWLRKLKDALNDAKDLLDDLAAQALNQKVEAPFIIVTQVQNFFFCGEMARRIRKITERLHQIDEERSLFDSTHFTMPLNNDQILANRKKISHSVPVTGIIGRENDKKEIIDKLSRDNDESLSVIPIHGIGGLGKTRLAECVFDDDWVEGYFDSRLWIQVSDDLKVECVAKKIIEAISNADFDHLNMHDLRNYLSQTLDAKKFLLVLDDVWIANALEWDTLRRLLKTDVKGSKIIVTTRYKITASIMGGENLLSLASLPFDASWYLFDRWAFLGGGSMKHPNLIKIGAEIVERCGGVPLALRTLGSLLCLNTNETYWLSVKNDESWERAKREDDILPVLKISYDQLPSHLKECFAYCSLLPKGKDFDKETVIQLWMAQGLIHSASGCEQLEDVGSWYFDELVSRSLFDVVQKNHKAEIVKCRMHDLMHDLAKSVAGSECLQVDFHSAGMFESPRHVSFWDSQCLKEDIILSLKASKLRSLLLPVKLGPLSSTILGVFLSDSTYLRILDLSNSGIRYLPNCLGCLKHLRYLNLNGNHDLEYLPDSICGLHFLQTLKLLGCMKINKFPRKFSNLVSLRNLVINSPRMPIWEKQLGSLTSLRSLSIVYCDNLVSLSEGIQHLRALRTLRIQNCGKLTCLANGKENCISLENLEIINCKKISSLEDCLKGLHNLRSLTIKGLPRLPQLDEFAR 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3381 749 SUPERFAMILY L domain-like 482 737 - -
Prci1g3381 749 FunFam Probable disease resistance protein At1g61300 145 311 - -
Prci1g3381 749 Pfam NB-ARC domain 163 404 IPR002182 GO:0043531
Prci1g3381 749 Pfam Rx N-terminal domain 10 91 IPR041118 -
Prci1g3381 749 Gene3D - 318 402 IPR042197 -
Prci1g3381 749 PANTHER DISEASE RESISTANCE PROTEIN RP 57 744 IPR044974 GO:0006952
Prci1g3381 749 PRINTS Disease resistance protein signature 257 271 - -
Prci1g3381 749 PRINTS Disease resistance protein signature 354 368 - -
Prci1g3381 749 PRINTS Disease resistance protein signature 677 693 - -
Prci1g3381 749 PRINTS Disease resistance protein signature 184 199 - -
Prci1g3381 749 Gene3D - 8 123 - -
Prci1g3381 749 Gene3D Ribonuclease Inhibitor 520 748 IPR032675 -
Prci1g3381 749 Gene3D - 403 494 IPR036388 -
Prci1g3381 749 FunFam Probable disease resistance protein At1g63360 403 493 - -
Prci1g3381 749 Coils Coil 60 91 - -
Prci1g3381 749 Gene3D - 142 310 IPR027417 -
Prci1g3381 749 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 417 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3381 Prci-Chr1 51219720 51222407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3381 171 747 WRKY Transcription Factor Family AT5G45050 23.547 1.02e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3381 - - pcin:129303124 1451.42