Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3374 ATGGGAATGGCCACGGAGTCCCGATTCCACGTGTTGGCCGTCGATGACAGCCTAATCGACCGGAAACTAATTGAGACACTTCTCAGGACCTCCTCCTATCAAGTCACCGCCGTTGATTCTGGCAGCAAGGCTTTGGAGTTTCTCGGTTTGCGTGACAATGATCAGACCGACCCTGATAAGCCTTCTGTTTCTCCTCACAGTAATCAGGAAGTGGATGTGAACCTTGTTATTACAGACTACTGTATGCCTGGCATGACTGGTTATGACTTGCTCAAGAAAATCAAGGAATCCTCGTCTCTGAGAAACATACCAGTGGTGATTATGTCATCAGAGAATGTCCCTTCCAGGATTAGCAAATGCTTAGAAGAAGGAGCAGAGGAATTTTTCTTGAAACCGGTGAAGCCAGCAGATCTGAATAGGCTTAGACCCCATATGATGAAGACCCAGAAATTGAAGGATCAAGCACATAAAAGAGACGAAAAGATTGAAACCCCAGAGATTCAACTAGCGTCACAATCACTAGTAGAGCAACAGCATCAACAGTCAGTGCAGCTAGTCAATACTAACAAGAGGAAGACCGTGGAAGAGGGGCTTTCCATTGAAACTGACAGAACAAGAACAAGATACAATGGCATAGCCACTGTGGTCTGA 651 0.4578 MGMATESRFHVLAVDDSLIDRKLIETLLRTSSYQVTAVDSGSKALEFLGLRDNDQTDPDKPSVSPHSNQEVDVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISKCLEEGAEEFFLKPVKPADLNRLRPHMMKTQKLKDQAHKRDEKIETPEIQLASQSLVEQQHQQSVQLVNTNKRKTVEEGLSIETDRTRTRYNGIATVV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3374 216 CDD REC_typeA_ARR 11 141 - -
Prci1g3374 216 Pfam Response regulator receiver domain 11 139 IPR001789 GO:0000160
Prci1g3374 216 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 192 IPR045279 GO:0009736
Prci1g3374 216 Gene3D - 10 211 - -
Prci1g3374 216 SMART REC_2 9 142 IPR001789 GO:0000160
Prci1g3374 216 SUPERFAMILY CheY-like 8 156 IPR011006 -
Prci1g3374 216 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3374 Prci-Chr1 51169718 51171760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3374 1 216 Response Regulator Gene Family AT3G57040 61.570 5.83e-92 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci1g3374 Response_reg 4.4e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3374 K14492 - tcc:18598779 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3374 1 51169718 51171760 Prci1g3374 1 51169718 51171760 ECH