Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3362 ATGGCCAGCGATGGCAAGCAGAAAGATGCCGAGTTTTTCTTCGATCCGAACGAAGATGATGTCAACGATGACGATGAATCTACCAAGATTGCCATCGAGAGTGGTAGTGACGGAAGCGACGACGACGAAAATTGTGGATCACATCCTGACGCTTTCTCGTCGCAGCAATGGCCCCAAAGTTACAAAGAGACTGTCGATTCGTACACAATTGCTGCATCACCGAACATTGGGGCAGCTGTTCTACGAACACCGAGTTTGATATATTCAAGTTTTGTCAATCGTTCGAAAAGTAGTTTAAGCCTAGATGGAAAGACTCCTCTATTATCTGAGCAGGACTTAATTCAAAAGAAATCGTCATGGTTGGAGAGAGTTTCATTGCAAAAGGAACTTACTGGAGAATTACCTATTGGCCAAGGATGTAGCCTCACTCAAACAGTTTTCAACGGAGTTAATGTGATGGCTGGAGTCGGCCTTCTGTCCACATCCTATACAGTGAAACAAGGTGGATGGGCAAGCTTGGTGGTGCTGGTTCTTTTTGCAGTTGTATGTTGTTACACAGCCACACTTATGAGATACTGCTTTGAAAGCAGAGAAGGAATCCTGACATATCCAGATATCGGAGAAGCAGCTTTTGGAAGAGCTGGTCGTCTTGCCATATCCATTATTTTGTACACTGAATTATATTCATACTGCGTGGAGTTCATCATCTTGGAAGGAGATAACCTAACTAGGCTGTTTCCTGGAACATTCCTTGATTGGGGTGTTATCCAGTTGGATTCCGTGCACTTGTTTGGAATTTTGACTGCTCTTATTATCCTCCCCACGGTTTGGTTAAGGGACCTTCGTGTAATCTCCTATCTTTCAGCTGGAGGGGTTGTTGCAACAATTCTTATTGTCATTTGTGTGTTCCTTTCCGGGACAACAAGTGATATTGGGTTCCATCACACAGGTCAAGTTGTGAATTGGAGTGGCATTCCATTTGCTATTGGTATCTATGGGTTTTGCTACTCAGGACATTCAGTTTTTCCAAATATTTACCAGTCTATGGCTGACAAAACCAAATTTACCAGGGCATTAATCATATGCTTTCTTCTATGTGTTTTAATATATGGAGGTGTTGCGGTCATGGGATATCTCATGTTTGGTGAAGCCACCTTGTCTCAGATAACACTTAATATGCCGCCACACTCCTTTGTCTCTAAAGTTGCATTGTGGACCACAGTAATTAACCCGTTCACGAAATATGCTTTGCTGATGAACCCATTGGCAAGAAGCATAGAGGAGTTGCTGCCTGCCAGAATTGCAGATAATTGTTGGTGTTTCATTGCCCTTAGATCAGCGCTTGTTTTTTCTACAATTTGTTGTGCCTTTCTGATTCCGTTTTTTGGACTTGTGATGGCTCTAATTGGCTCTGTACTCAGTATTCTTGTGGCGGTCATAATGCCGGCTCTTTGTTTTATGAAAATTATGGACGGAAAGGCGACAAAAATGCAGGTTGCTCTGAGCGTGGCAATTGCAGTGTTGGGAGTCGTTAGTGGAATTCTGGGAACATATTCTTCAGTGAAAAGAATTGCTGAAAATTACTGA 1587 0.4279 MASDGKQKDAEFFFDPNEDDVNDDDESTKIAIESGSDGSDDDENCGSHPDAFSSQQWPQSYKETVDSYTIAASPNIGAAVLRTPSLIYSSFVNRSKSSLSLDGKTPLLSEQDLIQKKSSWLERVSLQKELTGELPIGQGCSLTQTVFNGVNVMAGVGLLSTSYTVKQGGWASLVVLVLFAVVCCYTATLMRYCFESREGILTYPDIGEAAFGRAGRLAISIILYTELYSYCVEFIILEGDNLTRLFPGTFLDWGVIQLDSVHLFGILTALIILPTVWLRDLRVISYLSAGGVVATILIVICVFLSGTTSDIGFHHTGQVVNWSGIPFAIGIYGFCYSGHSVFPNIYQSMADKTKFTRALIICFLLCVLIYGGVAVMGYLMFGEATLSQITLNMPPHSFVSKVALWTTVINPFTKYALLMNPLARSIEELLPARIADNCWCFIALRSALVFSTICCAFLIPFFGLVMALIGSVLSILVAVIMPALCFMKIMDGKATKMQVALSVAIAVLGVVSGILGTYSSVKRIAENY 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3362 528 Pfam Transmembrane amino acid transporter protein 141 520 IPR013057 -
Prci1g3362 528 Gene3D Amino acid/polyamine transporter I 138 525 - -
Prci1g3362 528 PANTHER OS05G0424000 PROTEIN-RELATED 145 511 - -
Prci1g3362 528 MobiDBLite consensus disorder prediction 1 15 - -
Prci1g3362 528 FunFam Amino acid transporter AVT1A 138 527 - -
Prci1g3362 528 MobiDBLite consensus disorder prediction 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3362 Prci-Chr1 51012971 51018654 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3362 18 463 Amino Acid or Auxin Permease AAAP Family AT2G41190 63.080 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3362 K15015 - gmx:100790344 749.584