Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3353 ATGGGTAGTAGAACAATAAATACTAAGACCGACAACAATAACAAGTTTGCGAACGGCATGCCGAGTTACGCTCCTCCGCTGCCTACTTCTTCTTCCATGGGTACGGAAGGAACTACTGTTATTCCTTCCCGAATTTCTGAATTTGGAGGCATTGATCAGTCTTTTGGATTTCGTGTGGAGGACGCTATCAATCTTAGCAGAAATCCTGTATTCAATCAAATGAAGTCAAATAACCAGCCTCTAGGCGTTGATGTTCAATTTGGCACTTTAAATAAGACATTACCACTACAAAATGACTCAAATTCCAACCTGGCTTCTACATCTGGTGGCCAGCGTGAGAACTGGGGGGAGTCCAACATGGCAGATGGTAGCCCAAGGACTGACACTTCAACAGATGATACAGATGATAAAAATCAGAGGTCTGAGAGGGGTCAATTAGCTGTTGGAGCCTCTGATTCCAGTGAGAGATCAAAAGATAAAACAGATCAGAAGACATTACGGCGCCTAGCTCAAAATCGTGAAGCTGCAAGAAAAAGTCGGCTACGGAAAAAAGCATATGTGCAGCAACTAGAAAGTAGCAGGCTGAAACTAACTCAACTTGAGCAGGAGCTCCAGCGAGCCCGCCAGCAGGGCATATTTATTTCGAGTATGGGAGATCAGTCTCATTCAATGAGCGGAAATGGTGCAATGACGTTTGATGTAGAGTATGCACGTTGGTTAGAAGAGCATAATCGGCAGATAAATGAGCTAAGGGCTGCAGTCAATTCTCATGCTGGAGACATTGAACTACGGACAATTGTTGACAATGTTATGACGCACTATGAAGAGATTTTCAGGCTTAAGGGTGTTGCAGCCAAAGCTGATGTCTTCCACATCCTATCTGGAATGTGGAAAACACCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCGGAGCTTCTCAAGCTTCTTGGAAGTCATTTGGAGCCATTAACAGAGCAACAGTTGATGAACATTTACAGCCTGCAACAGTCATCCCAACAGGCTGAAGATGCACTGTCCCAAGGAATGGATGCATTACAGCAGTCATTGGCTGAGACATTGGCTAATGAATCATCCACCCCCTCAGGGCCATCAGGAAATGTGGCAAACTATATGGGGCAGATGGCTATGGCGATGGGAAAGCTGGGTACTCTTGAGGGGTTTCTTCGCCAGGCTGACAATCTGCGACAGCAAACATTACAACAAATGCTGCGGATATTAACCACAAGGCAGTCAGCTCGAGCTCTTCTTGCAATAAGTGATTATTTCTCCAGGCTACGAGCCCTGAGTTCGCTGTGGCTTGCCAGGCCAAGGGAGTGA 1350 0.4593 MGSRTINTKTDNNNKFANGMPSYAPPLPTSSSMGTEGTTVIPSRISEFGGIDQSFGFRVEDAINLSRNPVFNQMKSNNQPLGVDVQFGTLNKTLPLQNDSNSNLASTSGGQRENWGESNMADGSPRTDTSTDDTDDKNQRSERGQLAVGASDSSERSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSMGDQSHSMSGNGAMTFDVEYARWLEEHNRQINELRAAVNSHAGDIELRTIVDNVMTHYEEIFRLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLGSHLEPLTEQQLMNIYSLQQSSQQAEDALSQGMDALQQSLAETLANESSTPSGPSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3353 449 Gene3D - 163 217 - -
Prci1g3353 449 SUPERFAMILY Leucine zipper domain 164 207 IPR046347 GO:0003700|GO:0006355
Prci1g3353 449 PANTHER TRANSCRIPTION FACTOR TGA9 109 449 - -
Prci1g3353 449 Pfam Seed dormancy control 246 320 IPR025422 GO:0006351|GO:0043565
Prci1g3353 449 Coils Coil 183 210 - -
Prci1g3353 449 MobiDBLite consensus disorder prediction 94 166 - -
Prci1g3353 449 MobiDBLite consensus disorder prediction 128 142 - -
Prci1g3353 449 MobiDBLite consensus disorder prediction 1 36 - -
Prci1g3353 449 FunFam BZIP family transcription factor 163 212 - -
Prci1g3353 449 SMART brlzneu 160 223 IPR004827 GO:0003700|GO:0006355
Prci1g3353 449 MobiDBLite consensus disorder prediction 94 127 - -
Prci1g3353 449 Coils Coil 240 260 - -
Prci1g3353 449 Pfam bZIP transcription factor 164 204 IPR004827 GO:0003700|GO:0006355
Prci1g3353 449 CDD bZIP_HBP1b-like 164 216 - -
Prci1g3353 449 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 167 182 IPR004827 GO:0003700|GO:0006355
Prci1g3353 449 ProSiteProfiles DOG1 domain profile. 229 446 IPR025422 GO:0006351|GO:0043565
Prci1g3353 449 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 162 206 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3353 Prci-Chr1 50971690 50976985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3353 120 449 bZIP Transcription Factor Family AT3G12250 77.341 0.0 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci1g3353 DOG1 2.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3353 K14431 - qsa:O6P43_010042 694.501