Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3333 ATGGAAATGATTCTGAGAATTTTAAACTTGGAGTTAGAGGAAGTATTACAGATGTATATGACAGAACTACCCGGAATGAATTATGCTGCGAATACTGGAAAGCAATCAAAATTTCTTGAAAGATGTGTAACTAATGGGAAATATCGTACACTGCTCTTGAAATCTGGTTCTATTGGAGATTTTGGAAAGGTCATAGCTGCCATCACGTATCAAATAGTCCCTGCAGATACAGAGTATGCAGAGATCCCACTTGCAGCGGTTAGTGCAATCTGTCAAGGCAAGGGTCTGGGTCATATGTTGTTTGTAGAGCTACGGAAGAGACTTCAACATGTTGGTATTCGTTCAATTTTCTGCTGGGGTGACAAAGAATCTGAAGGGTTTTGGCTTAAACAGGGTTTTATATCTATAGCAGAGGTGGACACCAAAGGTAGAGCTCGCAGGTTACCTATAAAAGCTGCTATTCGTAAAGCATTATGCTTTCCTGGTGGTTCTACTCTCATGGTTTGCCATCTAAGGATGGAATTGTTAGCTGATGCTGCTAACTCTATGAAGTGTCTTCCCTCAAAACATCAGAATTGCTTGACATTTGGAAATGCTGAGAACGATCAGCTTAAATCTACAGGACAGTTGCACATTGATTTGAACTTTTCACATAAATCTATTGATAGACCAGATAATATGGAGACTAGTCATCCTAAGGCTTTGGTGAATGAAGGATTTTTCGGAGAATATGATAAATTGGGTGTCGGGGACTCACTGCTGACTGTTGTTCGACTTGCAAACAATGGAGTTGGTGCAGAAATGAAGGATTGTTCTAATTCCACAAAAGGTGCAAAGAGGACATGGGAAGCCTCTTTGTCATCGTTAAAGTCAAAAAGAGTGAAAGGAAGCCATTTAGTTGACAGTGGATCTGAGTCTAGCTGGGGTTTTGTCTCAGAGGTTGCTAGGACTAGTTCTTGCTTTGTGGGATGCTCATGGGGCGTTTCAAGTGGAAAGAGTTCAGTGGAGCGTCCATGTGGTGATTCTTTGAGTGTCCAAGGAAAGAATTCTGAGAAACCTAAAGGGGATTATTTACAGTTAGAAGCTCAAGTCAACAATGAACAGCTATCAACTAAACAATGCTTTAGAATCATGCTGATGAATATAACTGATGATGCTAAGAAAACGCATCTTACAAAGGCAATTGAAGCCCTTGGTGGCACTGTTACCTCTGAAGGAAGCATGGCCACGCATGTTGTCACAGGCAAAGTGAGGAAAACTTTGAATTTCTGTACTGCCCTTTGCTCAGGGGCTTGGGTGGTCTCATCTGATTGGTTAAAAGAAAGCTGTCGTGAAGGCAAATTTGTTGATGAGCTAGCTTATATATTGGATGACAAGGATTATCTATTGAAGTACAGGTCTGATTTAAAAGCTGCAGTTCTCCAAGCAAAAGCCAACCCTCGAGCTTTGTTCAAGGGGTACGACGTGTGTATTGCGGATCATGTTCAACCTCCTGCTAAAACACTATCTGCAATTGTGAGCTCTGCTGGTGGTAATGTTATTTGTGGGTTGAAGAAAGTAAATGAAGCATCTTCAACCATTTTTGTGACATGTGAAGAAGATATGGAAGAAGCAATGGTAGCTGCAAAGAAGGGGATCCGGACTTTCAGCACTGAGTGGTTTATGAACTGTGTCATGAGGCAGGAACTTGACCTGGAGGCCTTTCAATTTGCAGAGTCCTTGTGA 1725 0.4157 MEMILRILNLELEEVLQMYMTELPGMNYAANTGKQSKFLERCVTNGKYRTLLLKSGSIGDFGKVIAAITYQIVPADTEYAEIPLAAVSAICQGKGLGHMLFVELRKRLQHVGIRSIFCWGDKESEGFWLKQGFISIAEVDTKGRARRLPIKAAIRKALCFPGGSTLMVCHLRMELLADAANSMKCLPSKHQNCLTFGNAENDQLKSTGQLHIDLNFSHKSIDRPDNMETSHPKALVNEGFFGEYDKLGVGDSLLTVVRLANNGVGAEMKDCSNSTKGAKRTWEASLSSLKSKRVKGSHLVDSGSESSWGFVSEVARTSSCFVGCSWGVSSGKSSVERPCGDSLSVQGKNSEKPKGDYLQLEAQVNNEQLSTKQCFRIMLMNITDDAKKTHLTKAIEALGGTVTSEGSMATHVVTGKVRKTLNFCTALCSGAWVVSSDWLKESCREGKFVDELAYILDDKDYLLKYRSDLKAAVLQAKANPRALFKGYDVCIADHVQPPAKTLSAIVSSAGGNVICGLKKVNEASSTIFVTCEEDMEEAMVAAKKGIRTFSTEWFMNCVMRQELDLEAFQFAESL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3333 574 Gene3D BRCT domain 481 573 IPR036420 -
Prci1g3333 574 Gene3D BRCT domain 361 480 IPR036420 -
Prci1g3333 574 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 14 153 - -
Prci1g3333 574 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 366 456 IPR001357 -
Prci1g3333 574 CDD NAT_SF 62 119 - -
Prci1g3333 574 Gene3D - 8 151 - -
Prci1g3333 574 ProSiteProfiles BRCT domain profile. 377 456 IPR001357 -
Prci1g3333 574 SMART BRCT_7 369 446 IPR001357 -
Prci1g3333 574 SMART BRCT_7 481 561 IPR001357 -
Prci1g3333 574 SUPERFAMILY BRCT domain 376 458 IPR036420 -
Prci1g3333 574 Pfam Acetyltransferase (GNAT) family 59 133 IPR000182 GO:0016747
Prci1g3333 574 CDD BRCT_PAXIP1_rpt6_like 483 564 - -
Prci1g3333 574 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 3 178 IPR000182 GO:0016747
Prci1g3333 574 ProSiteProfiles BRCT domain profile. 479 563 IPR001357 -
Prci1g3333 574 SUPERFAMILY BRCT domain 476 563 IPR036420 -
Prci1g3333 574 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 11 140 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3333 Prci-Chr1 50854738 50863250 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Prci1g3333 RTT107_BRCT_5 3.4e-07 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3333 - - pcin:129289715 1128.62