Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3332 ATGGAGGTACGGAAGAAGGTTCTGGTGTTTCACCTAGATCCTTCAAAGGATACGCTCAAGGGAGTTAGGTCAAGGAGCGGGAATGAGAGGGGTCAGACTGGTGAGATGGAGGAGAATGAATGCTTGGATTCGATTAGATCTGAAATTAAAGTGGTGAGGCACATGAGAGGTAACTGCGAGATTATCGTTGAGGCCAAACGTTTCACCTGTAAGTCGGATTCAAATGGCCTCCAAATTTCTCTTCCTACAAGCGGGAAGATTAAAGTAGCTGTTGCGAAAGGCAAAATTACGAATAATGGAAATGATTCTGAGAATTTTAAACTTGGAGTTAGAGATCATGAATTCGTCCTTGTTAATCCTAAAGATGCTGACGGCACCAGCAAATCCTACCTACAGGAAGTATTACAGATGTATATGACAGAACTACCCGGAATGAATTATGCTGCGAATACTGGAAAGCAATCAAAATTTCTTGAAAGATGTGTAACTAATGGGAAATATCGTACACTGCTCTTGAAATCTGGTTCTATTGGAGATTTTGGAAAGGTCATAGCTGCCATCACGTATCAAATAGTCCCTGCAGATACAGAGTATGCAGAGATCCCACTTGCAGCGGTTAGTGCAATCTGTCAAGGCAAGGGTCTGGGTCATATGTTGTTTGTAGAGCTACGGAAGAGACTTCAACATGTTGGTATTCGTTCAATTTTCTGCTGGGGTGACAAAGAATCTGAAGGGTTTTGGCTTAAACAGGGTTTTATATCTATAGCAGAGGTGGACACCAAAGGTAGAGCTCGCAGGTTACCTATAAAAGCTGCTATTCGTAAAGCATTATGCTTTCCTGGTGGTTCTACTCTCATGGTTTGCCATCTAAGGATGGAATTGTTAGCTGATGCTGCTAACTCTATGAAGTGTCTTCCCTCAAAACATCAGAATTGCTTGACATTTGGAAATGCTGAGAACGATCAGCTTAAATCTACAGGACAGTTGCACATTGATTTGAACTTTTCACATAAATCTATTGATAGACCAGATAATATGGAGACTAGTCATCCTAAGGCTTTGGTGAATGAAGGATTTTTCGGAGAATATGATAAATTGGGTGTCGGGGACTCACTGCTGACTGTTGTTCGACTTGCAAACAATGGAGTTGGTGCAGAAATGAAGGATTGTTCTAATTCCACAAAAGGTGCAAAGAGGACATGGGAAGCCTCTTTGTCATCGTTAAAGTCAAAAAGAGTGAAAGGAAGCCATTTAGTTGACAGTGGATCTGAGTCTAGCTGGGGTTTTGTCTCAGAGGTTGCTAGGACTAGTTCTTGCTTTGTGGGATGCTCATGGGGCGTTTCAAGTGGAAAGAGTTCAGTGGAGCGTCCATGTGGTGATTCTTTGAGTGTCCAAGGAAAGAATTCTGAGAAACCTAAAGGGGATTATTTACAGTTAGAAGCTCAAGTCAACAATGAACAGCTATCAACTAAACAATGCTTTAGAATCATGCTGATGAATATAACTGATGATGCTAAGAAAACGCATCTTACAAAGGCAATTGAAGCCCTTGGTGGCACTGTTACCTCTGAAGGAAGCATGGCCACGCATGTTGTCACAGGCAAAGTGAGGAAAACTTTGAATTTCTGTACTGCCCTTTGCTCAGGGGCTTGGGTGGTCTCATCTGATTGGTTAAAAGAAAGCTGTCGTGAAGGCAAATTTGTTGATGAGCTAGCTTATATATTGGATGACAAGGATTATCTATTGAAGTACAGGTCTGATTTAAAAGCTGCAGTTCTCCAAGCAAAAGCCAACCCTCGAGCTTTGTTCAAGGGGTACGACGTGTGTATTGCGGATCATGTTCAACCTCCTGCTAAAACACTATCTGCAATTGTGAGCTCTGCTGGTGGTAATGTTATTTGTGGGTTGAAGAAAGTAAATGAAGCATCTTCAACCATTTTTGTGACATGTGAAGAAGATATGGAAGAAGCAATGGTAGCTGCAAAGAAGGGGATCCGGACTTTCAGCACTGAGTGGTTTATGAACTGTGTCATGAGGCAGGAACTTGACCTGGAGGCCTTTCAATTTGCAGAGTCCTTGTGA 2082 0.4212 MEVRKKVLVFHLDPSKDTLKGVRSRSGNERGQTGEMEENECLDSIRSEIKVVRHMRGNCEIIVEAKRFTCKSDSNGLQISLPTSGKIKVAVAKGKITNNGNDSENFKLGVRDHEFVLVNPKDADGTSKSYLQEVLQMYMTELPGMNYAANTGKQSKFLERCVTNGKYRTLLLKSGSIGDFGKVIAAITYQIVPADTEYAEIPLAAVSAICQGKGLGHMLFVELRKRLQHVGIRSIFCWGDKESEGFWLKQGFISIAEVDTKGRARRLPIKAAIRKALCFPGGSTLMVCHLRMELLADAANSMKCLPSKHQNCLTFGNAENDQLKSTGQLHIDLNFSHKSIDRPDNMETSHPKALVNEGFFGEYDKLGVGDSLLTVVRLANNGVGAEMKDCSNSTKGAKRTWEASLSSLKSKRVKGSHLVDSGSESSWGFVSEVARTSSCFVGCSWGVSSGKSSVERPCGDSLSVQGKNSEKPKGDYLQLEAQVNNEQLSTKQCFRIMLMNITDDAKKTHLTKAIEALGGTVTSEGSMATHVVTGKVRKTLNFCTALCSGAWVVSSDWLKESCREGKFVDELAYILDDKDYLLKYRSDLKAAVLQAKANPRALFKGYDVCIADHVQPPAKTLSAIVSSAGGNVICGLKKVNEASSTIFVTCEEDMEEAMVAAKKGIRTFSTEWFMNCVMRQELDLEAFQFAESL 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3332 693 MobiDBLite consensus disorder prediction 19 39 - -
Prci1g3332 693 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 485 575 IPR001357 -
Prci1g3332 693 ProSiteProfiles BRCT domain profile. 496 575 IPR001357 -
Prci1g3332 693 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 114 272 - -
Prci1g3332 693 CDD NAT_SF 181 238 - -
Prci1g3332 693 Gene3D BRCT domain 600 692 IPR036420 -
Prci1g3332 693 Pfam Acetyltransferase (GNAT) family 178 252 IPR000182 GO:0016747
Prci1g3332 693 SMART BRCT_7 488 565 IPR001357 -
Prci1g3332 693 SMART BRCT_7 600 680 IPR001357 -
Prci1g3332 693 SUPERFAMILY BRCT domain 495 577 IPR036420 -
Prci1g3332 693 SUPERFAMILY BRCT domain 595 682 IPR036420 -
Prci1g3332 693 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 142 259 IPR016181 -
Prci1g3332 693 ProSiteProfiles BRCT domain profile. 598 682 IPR001357 -
Prci1g3332 693 Gene3D BRCT domain 480 599 IPR036420 -
Prci1g3332 693 CDD BRCT_PAXIP1_rpt6_like 602 683 - -
Prci1g3332 693 Gene3D - 112 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3332 Prci-Chr1 50854738 50869143 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Prci1g3332 RTT107_BRCT_5 4.4e-07 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3332 - - pcin:129289715 1387.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3332 1 50854738 50869143 Prci1g3332 1 50854738 50869143 ECH