Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3324 ATGGCAAAGTGGAAGTGCTGGTTCGGATGGGTGAAAAGGCTCTTCGCTCCTGAGTCAAAGGCCAAAAAGCCAAAGAAATGGGGATGGAGTCTTGGAAGGTTAAAGCTGAAACAGTATCCCACACTTACAGCACCAAATAGAGCACTTGCTAAAGCAAGAGAAGAGCAGAGAAAGCATGCTTTGACTGTGGCCATTGCAACAGCAGCTGCTGCAGAGGCTGCTGTTGCTGCTGCTCATGCTGCTGCTGAGGTTGTCCGTCTAACCGGTCATTCCTATTCTTATATATCCAAAGGAGATCGAAACTTGGCTGCCACAAAAATTCAACGTGCATACCGCGGATATCTTGCTAGGAAAGCATTGAGAGCATTGAAGGGAGTTGTGAGACTTCAAGCTATAGTTCGTGGTCAAGCTGTGAGACGTCAAGTGTTCAGCACTCTGAAGAATTTGCCTTCCAATGCAAGAGAGCAGGAAGAAATCCATGAAAGAAGCAATCATTCTGCAGATAAAAGTTACAAAAACGACAAGAGCAATCAGTTTTCAAGTCAGAAAAAGAAGTTAGAAGAGAGGGAAATTAAGCCTGATTGCCATGCTCGAAGGACTTGGGATTCCAGCTTGCATTCGAAAGAAGACGTAGAAGCCATATGGTTGAGAAAACAAGAGGCCAATAGCAAAAGAGAGCGCATGAAACAGTATTCCTTCTCTCACAGGGAGAGAAAAAATTCACACATGATAGAAGAATATGGACCCTGTAAGGAATTCGGAAGAGAGAGCTGCCGCACTCTAGGACAATGGCTGCAGGAAGAAACATATAATAGAGATGCGTTTCATAAACCAGACATTCTCTCAGACCTGATGACAAGAGACTTGCATGGTTCAACACAAGTTGCACTGAAGAGTGCAAAGAGAGAAGAGTCACAGGAAGGATTAATTCCACACATTTCACTCTCAAGAAAATCATTTTCTCACGTAAAGAAAGTGTCATCACTTGCAGATGGTAGTTCCATGCCAAATTCTCCATTTTTTCCCACTTACATGGCCGTGACAGAATCAGCAAAGGCAAAATCAAGATCTATAAGCACACCAAAGCAGAGAACAGAATTTCTGGAATTATGCCCCAATCAGATTGAACCTCACAAGGAAGGCATATCTTTTTGGTCCTGTCATTATGGTGAGCCTGCCAGCACCCGTGGAGACAAAGAGTTTTTTCGGCAGAGATGTCAGAGTGCAGATCACCATCATTATCATTAG 1248 0.4375 MAKWKCWFGWVKRLFAPESKAKKPKKWGWSLGRLKLKQYPTLTAPNRALAKAREEQRKHALTVAIATAAAAEAAVAAAHAAAEVVRLTGHSYSYISKGDRNLAATKIQRAYRGYLARKALRALKGVVRLQAIVRGQAVRRQVFSTLKNLPSNAREQEEIHERSNHSADKSYKNDKSNQFSSQKKKLEEREIKPDCHARRTWDSSLHSKEDVEAIWLRKQEANSKRERMKQYSFSHRERKNSHMIEEYGPCKEFGRESCRTLGQWLQEETYNRDAFHKPDILSDLMTRDLHGSTQVALKSAKREESQEGLIPHISLSRKSFSHVKKVSSLADGSSMPNSPFFPTYMAVTESAKAKSRSISTPKQRTEFLELCPNQIEPHKEGISFWSCHYGEPASTRGDKEFFRQRCQSADHHHYH 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3324 415 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Prci1g3324 415 MobiDBLite consensus disorder prediction 149 192 - -
Prci1g3324 415 ProSiteProfiles IQ motif profile. 100 128 IPR000048 GO:0005515
Prci1g3324 415 MobiDBLite consensus disorder prediction 153 192 - -
Prci1g3324 415 SMART iq_5 99 121 IPR000048 GO:0005515
Prci1g3324 415 Gene3D - 98 149 - -
Prci1g3324 415 Pfam IQ calmodulin-binding motif 103 121 IPR000048 GO:0005515
Prci1g3324 415 PANTHER IQ-DOMAIN 5-RELATED 4 378 - -
Prci1g3324 415 Pfam Protein of unknown function (DUF4005) 335 366 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3324 Prci-Chr1 50807083 50810060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3324 1 391 IQD Protein Family AT5G03960 44.140 6.75e-71 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3324 - - gmx:100800767 441.039