Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3302 ATGGGGCTCAGGAGCGTTGTGTGGGAAGATCTCTCCGTGCAGGTCGCCGCCGACACGAGGGTGCTTCTCCATCCGACCACCGCCTTCGCTCAATCTGCTCGTCTCTTTGCTCTCTTGGGTCCTTCCGGCTCCGGCAAGACCACCCTTCTCCACTCTCTTTCCGGAAGACCTCATGCAAATGCTTCAGTGACCGGCGACATCCTAATTAATGGGAAGAAGAGAAAGTGGCATCATGGAGAGATGTCTTATGTTGCTCAAGAAGAGACTTTCATGGGAACTTTGACGGTGAGAGAAACTCTCACATACTCTGCGAAAATGAGGTTGATTTCAAAAATGACCAAAGAAGAGATAAGTCAGGTGGTTCAGCGCACTATAATGGAAATGGGACTTGAAGAATGTGCTGATAATCATATTGGGAACTGGCATTTGCGAGGAATCAGTAATGGTGAAAAGAAGAGACTGAGCATTGGCCTTGAGATTCTCACGCAACCTAGCGTGTTATTTCTCGATGAACCTACCAGCGGACTCGATAGTGCCTCGGCTTTCTACGTAATCCAATCCCTAAGCCAGATAGCTCTGGGCGGAAAAATAATTATGTGTTCGATTCACCAACCGAGTAATGAAATCTTTCATCTGTTTGATGATTTGCTTCTGCTCTCAGGTGGAGAAACTGTTTATTTCGGCGAGGCCAAGATGGCTTTAGAGTTTTTTGCTAATGCAGGCTTCCCCTGCCCAACAAGAAGAAACCCTTCAGATCACTTCCTTCTATGCGTCAATCTGGACTTTGAATTGATTGCAACATCATCGAATTCTGCAATGGACGTCAAAACATCGGAGGGTAGAGCGGCCCTTATTCACAGTTACAAAACATCAGAGATAATGGTCAACGCAAGAAGAAAGATTCAAGATCTGATATCTGATCCGCAGGAAGAAATGGTAATTCAGTCCGACATTAGAACAAGCACTAGCACTTGGTGGAAGCAACTCTGCACATTGACCCAACGATCTTTCCTGAACATGACCAGGGACATGGGTTATTACTGGCTCAGGATCATTTTCTACGTAATGGTCTCAATCAGTGTTGGAACCCAATTTTATCATATTGGTACACACAGCACCTCAATCTTAGCCAGAGGAAAGTGCATATCATTCATCTACGGCTTCATGATTTGTTTATCATGTGGAGGATTGCCATTTTTCATTGAAGAATTAAAGGTGTTCTATGGTGAAAGGTCCAAAGGACATTATGGGGAAGCCGTGTTTGTACTGTCAAACATCCTATCATCGTTCCCTTTCCTTGTTCTGACATCGCTCTTATCCGGAACGATCATATACTACATGGTGCAGTTTCATCCAGGCTTAACCCATTATGCATTCTTCTGCATCAACTTGTTCTGCTGCTTATCAGTTGTCGAGGGCTGCATCATGGTTGTGGCCTCAATGGTTCCCAATGTCCTGATGGGCATTGGAGTAGGAACTGGTGTAATAATCTTTATGATGATGTCTTCACAAATCTTCAGACCACTACCCGACATTCCCAAGTTCTTTTGGCGCTATCCTATGTCCTACCTCAGTTTTGCAACTTGGGCTGTACAGGGACAGTACAAGAATGACATGGTGGGGCTAGAGTTTGATGCTCTGCTACCTGGTGAGTCAAGAGTAAAGGGAGAGCAAATCCTAAAGACGGTATTTGGGGTTCCATTGGATCATGGCAAGTGGTGGGACTTAACAGCGTTGCTTTCATTACTATTACTTAACCGAATGCTCCTCTTTGTTGTACTTTGGCACAACAATAGGCCCAAAATAAGCATGCTGGGGCATTACGCAAAGGTCTTTGCTGCAAGATTTTCACCAAGTAAAATGCCATCTGTCTCTTCCAATAAGAAGCAACTTGCTCTCCGGCCATTATCTTCTCAAGAGGGTCTCATGTCCCCGAATTTTGCAATTTGA 1950 0.4487 MGLRSVVWEDLSVQVAADTRVLLHPTTAFAQSARLFALLGPSGSGKTTLLHSLSGRPHANASVTGDILINGKKRKWHHGEMSYVAQEETFMGTLTVRETLTYSAKMRLISKMTKEEISQVVQRTIMEMGLEECADNHIGNWHLRGISNGEKKRLSIGLEILTQPSVLFLDEPTSGLDSASAFYVIQSLSQIALGGKIIMCSIHQPSNEIFHLFDDLLLLSGGETVYFGEAKMALEFFANAGFPCPTRRNPSDHFLLCVNLDFELIATSSNSAMDVKTSEGRAALIHSYKTSEIMVNARRKIQDLISDPQEEMVIQSDIRTSTSTWWKQLCTLTQRSFLNMTRDMGYYWLRIIFYVMVSISVGTQFYHIGTHSTSILARGKCISFIYGFMICLSCGGLPFFIEELKVFYGERSKGHYGEAVFVLSNILSSFPFLVLTSLLSGTIIYYMVQFHPGLTHYAFFCINLFCCLSVVEGCIMVVASMVPNVLMGIGVGTGVIIFMMMSSQIFRPLPDIPKFFWRYPMSYLSFATWAVQGQYKNDMVGLEFDALLPGESRVKGEQILKTVFGVPLDHGKWWDLTALLSLLLLNRMLLFVVLWHNNRPKISMLGHYAKVFAARFSPSKMPSVSSNKKQLALRPLSSQEGLMSPNFAI 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3302 649 Pfam ABC-2 type transporter 203 308 IPR043926 GO:0140359
Prci1g3302 649 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 6 246 IPR003439 GO:0005524
Prci1g3302 649 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 237 IPR027417 -
Prci1g3302 649 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 5 610 - -
Prci1g3302 649 SMART AAA_5 32 223 IPR003593 GO:0016887
Prci1g3302 649 Pfam ABC transporter 34 174 IPR003439 GO:0005524
Prci1g3302 649 Pfam ABC-2 type transporter 328 533 IPR013525 GO:0016020|GO:0140359
Prci1g3302 649 Gene3D - 4 254 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3302 Prci-Chr1 50617061 50622059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3302 30 215 Calmodulin-binding Proteins AT2G36910 27.919 4.17e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3302 - K05681 gmx:100802207 899.042