Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3270 ATGGGTAATTGTTGTGTAACTCCGTCCGGACCTCGTGAGACGAAGAAGAAGGGAAAGAAGAAGAAGGCAAACCCGTTTGCCAGCGACGACGTGAACTACCTTGGCAACGGTGGAAGCAAGCTATCCGTTTTGAGCAATCCTACGGGTCACGAAATCGAGCGTAAATACGAGCTTGGCCGCGAGCTTGGGAGGGGAGAATTCGGAATAACCTACCTGTGTACCGATAGAGACACGGGTGAAGTTTTAGCTTGCAAATCGATATCCAAGAAGAAGCTGAGAACAGCCATAGATATCGACGATGTGAGAAGAGAAGTTGAGATCATGAAGCATTTACCAGAGCATTCAAACATCGTGACCTTAAAGGGCACCTATGAAGACGACAATGCCGTTCATCTGGTGATGGAATTGTGCGAAGGAGGAGAATTGTTCGATCGGATTGTGGCGCGTGGGCACTACACAGAACGCGCCGCCGCAGCGGTAACCCGGACGATTGTCGAAGTTGTGCAGATGTGCCACAAACATGGTGTGATGCATCGAGATCTCAAACCGGAGAACTTTTTGTTTGGAAACAAGAAAGAAACAGCACCTCTGAAGGCTATTGATTTTGGGCTGTCAGTGTTCTTTAAACCTGGTGAAAGATTTGATGAGATAGTTGGAAGTCCTTATTACATGGCTCCTGAGGTACTAAAACGAAACTATGGACCTGAAGTAGATATATGGAGTGCTGGAGTGATTCTTTACATCCTACTTTGTGGTGTTCCACCGTTTTGGGCAGAAACTGAACAGGGAGTTGCACAAGCTATTATAAGATCTGTTATTGATTTTAGAAGGGACCCATGGCCAAAAGTTTCTGATAATGCAAAAGACCTTGTTAAGAAGATGCTTGATCCTGACCCAAAGCGTCGGCTTTCTGCACAGCAAGTGTTGGATCATCCGTGGTTACAGAATGCCAAGAAAGCTCCTAATGTTTCTTTGGGAGAAACTGTTAAGGCAAGGCTCAAGCAATTCTCGGTAATGAACAAGCTTAAGAAAAGAGCTCTAAGGGTGATTGCAGAGCATTTGTCAGTAGAAGAAGTTGCAGGAATAAAAGAAGGATTCAAGACGATGGATACTGGCAATAGAGGCAAAATTAACATTGATGAGCTGCGCGTAGGATTGCATAAACTAGGCCATCAAATGGCTGATGCTGACATTGAAATTCTGATGGAAGCGGGAGATACTGACAGAGATGGATACCTAGATTATGGAGAATTTGTAGCCATTTCTGTTCATCTGAGAAAGATGGGCAATGATGAGCACCTAAAGAAAGCCTTCCAATTCTTCGATCAGAACCGGAGTGGATATATAGAGATTGAGGAGCTACGCAGTGCCTTAGCTGATGAAGTTGACACAAACAATGAAGAAGTCATTAATGCAATTATGCATGACGTCGACGCTGACAAGGATGGAAGAATAAGCTATGAGGAATTCGCTGCGATGATGAAGGCTGGCACAGATTGGAGGAAGGCATCAAGACAGTATTCACGAGAGAGGTTCACTAGTCTAAGTCTGAAATTGATGAAGGACGGATCCTTGCCATTAGACAACGACAAGCAATGA 1599 0.4472 MGNCCVTPSGPRETKKKGKKKKANPFASDDVNYLGNGGSKLSVLSNPTGHEIERKYELGRELGRGEFGITYLCTDRDTGEVLACKSISKKKLRTAIDIDDVRREVEIMKHLPEHSNIVTLKGTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQMCHKHGVMHRDLKPENFLFGNKKETAPLKAIDFGLSVFFKPGERFDEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFRRDPWPKVSDNAKDLVKKMLDPDPKRRLSAQQVLDHPWLQNAKKAPNVSLGETVKARLKQFSVMNKLKKRALRVIAEHLSVEEVAGIKEGFKTMDTGNRGKINIDELRVGLHKLGHQMADADIEILMEAGDTDRDGYLDYGEFVAISVHLRKMGNDEHLKKAFQFFDQNRSGYIEIEELRSALADEVDTNNEEVINAIMHDVDADKDGRISYEEFAAMMKAGTDWRKASRQYSRERFTSLSLKLMKDGSLPLDNDKQ 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3270 532 CDD STKc_CAMK 55 313 - -
Prci1g3270 532 Gene3D Transferase(Phosphotransferase) domain 1 142 322 - -
Prci1g3270 532 SUPERFAMILY EF-hand 343 521 IPR011992 -
Prci1g3270 532 ProSitePatterns EF-hand calcium-binding domain. 478 490 IPR018247 -
Prci1g3270 532 SUPERFAMILY Protein kinase-like (PK-like) 54 322 IPR011009 -
Prci1g3270 532 SMART serkin_6 56 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3270 532 Gene3D Phosphorylase Kinase; domain 1 58 141 - -
Prci1g3270 532 FunFam Calcium-dependent protein kinase 7 323 498 - -
Prci1g3270 532 ProSiteProfiles Protein kinase domain profile. 56 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3270 532 FunFam Calcium-dependent protein kinase 1 58 141 - -
Prci1g3270 532 MobiDBLite consensus disorder prediction 1 28 - -
Prci1g3270 532 ProSiteProfiles EF-hand calcium-binding domain profile. 429 464 IPR002048 GO:0005509
Prci1g3270 532 Gene3D - 323 497 - -
Prci1g3270 532 Pfam Protein kinase domain 56 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3270 532 SMART efh_1 469 497 IPR002048 GO:0005509
Prci1g3270 532 SMART efh_1 433 461 IPR002048 GO:0005509
Prci1g3270 532 SMART efh_1 397 425 IPR002048 GO:0005509
Prci1g3270 532 SMART efh_1 361 389 IPR002048 GO:0005509
Prci1g3270 532 ProSitePatterns EF-hand calcium-binding domain. 442 454 IPR018247 -
Prci1g3270 532 FunFam calcium-dependent protein kinase 13 142 322 - -
Prci1g3270 532 PANTHER SERINE/THREONINE-PROTEIN KINASE 50 490 - -
Prci1g3270 532 ProSiteProfiles EF-hand calcium-binding domain profile. 393 428 IPR002048 GO:0005509
Prci1g3270 532 ProSitePatterns Protein kinases ATP-binding region signature. 62 85 IPR017441 GO:0005524
Prci1g3270 532 ProSiteProfiles EF-hand calcium-binding domain profile. 465 500 IPR002048 GO:0005509
Prci1g3270 532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Prci1g3270 532 ProSiteProfiles EF-hand calcium-binding domain profile. 357 392 IPR002048 GO:0005509
Prci1g3270 532 ProSitePatterns EF-hand calcium-binding domain. 406 418 IPR018247 -
Prci1g3270 532 Pfam EF-hand domain pair 362 421 IPR002048 GO:0005509
Prci1g3270 532 Pfam EF-hand domain pair 432 495 IPR002048 GO:0005509
Prci1g3270 532 CDD EFh 433 495 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3270 Prci-Chr1 50307011 50311413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3270 1 530 EF-hand Containing Proteins AT5G19450 79.135 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci1g3270 Pkinase 2.9e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3270 K13412 - tcc:18598981 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3270 1 50307011 50311413 Prci3g2583 3 38629217 38634696 CCT